Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2126g00002 ATGGAATTTTTCATGCAATCTCTGTTAATTACCGTGATCACCATGGTTGCATGTGTGTATGTTTTTCAGAAAAGAAGAGCAGGTGGCACTAAAACCTTGCCCCCTGGTAGCTTTGGGTGGCCCCTAATGGGTGAAACCTACCAATTTTTGTTCATCAAGAGTGAACATTTCATTCGAGAGAGGGTCAAAAAGTACTCCTCACAGATCTTCCACACAAACATACTGGGAGAGCCAACAGTGGTTTTTTCTGGTCCTGCAGCACACAAATTTGTCTCCACCAATGAGACAAAGCTTCTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGATCAAATACATGCACCAAACTCGAAACCAAAACAAGAAGCTGCATCTTCTGCTCCAGTGAAGATCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAACAAAGTTGAATTAACCATGCATCAACATTTCATGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTACCCTCACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGGCAGTGAGTTTGAGTACTTGTATTTTGGGATCTACTCTGCTCCTGTGAATTTCCCGGGCTCTGCATACCGTAGGGCACTGAAGGCTTCGGCCGCAATAAGGAAAGAGATACAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGCAAATTGTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAGGGTGGAAAATATGTGCCAAGAATTGAAATAAGCAACATCATCATGGGGATGATGAATTCCAGCCACATGCCAATAGCTATTACTCTGGCTTTCATGATCAAACACATTGGACAAAGGCCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGGTATTACAAAATTCAAAAGATCTGGTGCAGCACTAGACTGGGACAGCCTACAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACTCTATCCAACCGCACCAGGTGTGTTCAGAGAGGCCATAACAGATATCGCATATGAAGGTTTTACTATTCCAAAAGGGTGGAAGATTTTTTGGTCACTGGTTGGGACAAATAGGGATCCCGACTACTTTTCTGAACCTGAAAGTTTTGACCCCTCAAGGTTTGAAGGGACCATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGACAAGACTACACGCGGTTTGTGGTCCTCAATTTCATTCACATTCTAATAAACAAGTTCAAGTGGGAAGTTACAGATCCTGATGAGAAAGTTTCAGGGGGTCTAATACCTACCCTAGCAGAAGGAGTATCTATCCGTCTTTATCACCACTAA 1419 0.4362 MEFFMQSLLITVITMVACVYVFQKRRAGGTKTLPPGSFGWPLMGETYQFLFIKSEHFIRERVKKYSSQIFHTNILGEPTVVFSGPAAHKFVSTNETKLLKVWYMKTQRRFFNIPDQIHAPNSKPKQEAASSAPVKILGILKPEGIARYMGNKVELTMHQHFMTHWEGKTEVKVYPLVKAFTLTLVCQFFLGIDEPKLGSEFEYLYFGIYSAPVNFPGSAYRRALKASAAIRKEIQFLIKEKIDALSKGQIVDDLLAHVVGAEQGGKYVPRIEISNIIMGMMNSSHMPIAITLAFMIKHIGQRPDIYQKIVSEHAGITKFKRSGAALDWDSLQKLKYTWAVAQETMRLYPTAPGVFREAITDIAYEGFTIPKGWKIFWSLVGTNRDPDYFSEPESFDPSRFEGTILPAPYTWIPFGAGPRSCPGQDYTRFVVLNFIHILINKFKWEVTDPDEKVSGGLIPTLAEGVSIRLYHH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2126g00002 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vium2126g00002 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS P450 superfamily signature 301 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 Pfam Cytochrome P450 34 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 CDD CYP90-like 61 471 - -
Vium2126g00002 472 PANTHER CYTOCHROME P450 26 31 449 - -
Vium2126g00002 472 Gene3D Cytochrome P450 23 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2126g00002 472 SUPERFAMILY Cytochrome P450 32 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2126g00002 Vium-Chr2126 52805 55568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2126g00002 32 375 Cytochrome P450 AT5G36110 32.778 2.85e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2126g00002 K20667 - var:108321875 907.131