Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2123g00005 ATGTTCACGGATAATTCACGGTGGATTCGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTATCCAAACAACTTCTAATGAAGCTAACATTAAGGAAGGTAGAAGCGAACCTTTTGTGGTCAAAGATTACAGAGGAGAATCGTACAAGAAACACCACCCTCCTTCCCTGAACGATGACGTTTGGCGATTAAAGCAAATTGCCAAAGATGGAAAAATTCACAAGAGGCTGTCCCTCCAGGGAATTCACACCGTGAAGGACCTTTTGCGGTTATACACAACAAATCCATCTTCATTACTTGAGAAGGTTGGCAACATTCCAAAGAGATCATGGATGTCAATTATTGAACATGTCAAGACTTGTGTGATAGATGACGACGAGACTTTTGTATACAACACAGCGGAGCAATCGACGAGTTTGATTTTCAATTCCATCTATGTCCTTGTGGGTGTGAGTTTTGATGGGCAAAATTATGTATCCCCTGATACTCTTAGCTCCGATGAAAAGGGTGTGGTGGAAATAATGAAACAGCATGCTTACCAAAATATGGATAATCTCATATCAGTTCACAAGACATCACTGAGCTGCTCAACACCATTGGCATGTGTAGGAGTGAGACAGTTTGATGCTACAGAGCAAGGTTTTCAACAGTTACATATCTCTACTGAACAAGAAGGTTATGGTCACCCGTATGCCTCAACTTCATATGGGGATGAAGGCCTTCCTAATCACAATATCTACTCTGATCCGAATTCAGTGCCAGACATAACAGACAAAATGTGTCTATTAGAGTATGTAGGCTTTGGTTGGTTTCCATAG 816 0.413 MFTDNSRWIRSRKFRLGAKVIQTTSNEANIKEGRSEPFVVKDYRGESYKKHHPPSLNDDVWRLKQIAKDGKIHKRLSLQGIHTVKDLLRLYTTNPSSLLEKVGNIPKRSWMSIIEHVKTCVIDDDETFVYNTAEQSTSLIFNSIYVLVGVSFDGQNYVSPDTLSSDEKGVVEIMKQHAYQNMDNLISVHKTSLSCSTPLACVGVRQFDATEQGFQQLHISTEQEGYGHPYASTSYGDEGLPNHNIYSDPNSVPDITDKMCLLEYVGFGWFP 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium2123g00005 271 PANTHER OS02G0177800 PROTEIN 2 240 IPR012416 GO:0005516
Vium2123g00005 271 Pfam Calmodulin binding protein-like N-terminal domain 2 42 IPR046831 -
Vium2123g00005 271 Pfam Calmodulin binding protein C-terminal domain 127 187 IPR046829 -
Vium2123g00005 271 Pfam Calmodulin binding protein central domain 55 120 IPR046830 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium2123g00005 Vium-Chr2123 25455 27883 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2123g00005 1 193 Calmodulin-binding Proteins AT5G57580 43.814 1.04e-49 171