Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2120g00003 ATGATTGTGCAGGTAATCCGTTTAACATGCGGAGGATTTGTTTTCGCTGCTCGCATGAACCACACAATCTGTGACTCATTGGGGTTGGTGCAATTTCTGACCATGGTGGGTGAGATTGCAAGAGGTGCTTCCATAACCAAGTTCCCTGTGTGGCAGAGAGAGTTATTCAGTGCAAGGAACCCACCAAGAATCACATGTGCACACAACGAATATGAAACCCAACATTGCCAGAAAGAAACATGGGACACCCACGAAATGGACCATGGATTATTTTTCTTTGGTCCCATAGAGATTGCAACCCTTCGGAGTCACCTTCCCATGCACCTCCAAAATTCTTCAACTTTTGAGGTGCTCTCTGCCTGTTTGTGGAAATGTCGAACCATAGCACTTGGGCTCAAACCCAACGAGAGTGTGGGCTTGTCACCCTTTATTACTGCTCGAGGCAAATTGGGCCAACAAGTGCCCAATGGGTATTATGGCAATGCCTTTGCCTTCCCAATGGCTCTTGCCAGGGTCGGGCCTTTGTGCCAAAACCCATTGGGGTATGCATTGGAGTTAGTAAAAAAGGCAAAGGCTCAGATGGGTGCGGAATATGTCAGTTCTGTGGCTGATCTTATGGTTCTAAAGGGTCGACCCAAGTATAGGACTGAAGGGAACTACCTTATTGGGGACACTACTCATGTGGGGTTCTATGAAGTGGATTTTGGGTGGGGGAGTCCTATATATGGAGGACCTGCTGGGGCTATACCTTTTGTTAGCTTCTATGGACGTTTTAGGAACAGTGAAGGAGAGGATGTAATTGTGGTGCCAATTTTGTTGCCACACCATGTCATGAGGAGGTTTCTCTCTGAACTGGTAAAGATCACAAACAAGGACCCTATGGACTTTTCTGATGAGAATATGCCAAATAGGTCCATGCTGTAA 924 0.4665 MIVQVIRLTCGGFVFAARMNHTICDSLGLVQFLTMVGEIARGASITKFPVWQRELFSARNPPRITCAHNEYETQHCQKETWDTHEMDHGLFFFGPIEIATLRSHLPMHLQNSSTFEVLSACLWKCRTIALGLKPNESVGLSPFITARGKLGQQVPNGYYGNAFAFPMALARVGPLCQNPLGYALELVKKAKAQMGAEYVSSVADLMVLKGRPKYRTEGNYLIGDTTHVGFYEVDFGWGSPIYGGPAGAIPFVSFYGRFRNSEGEDVIVVPILLPHHVMRRFLSELVKITNKDPMDFSDENMPNRSML 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2120g00003 307 Gene3D - 69 283 IPR023213 -
Vium2120g00003 307 Gene3D - 1 68 IPR023213 -
Vium2120g00003 307 Pfam Transferase family 2 283 - -
Vium2120g00003 307 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2120g00003 Vium-Chr2120 18080 19082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2120g00003 1 288 Monolignol Biosynthesis Gene Families AT5G48930 26.073 4.41e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2120g00003 - K19861 vra:106776703 610.527