Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2102g00001 ATGGAGATCTTGGGTTTACCTGGAACACTTGCTTTCTTTTCCTTTTTACCTCTTCTTTTGCTCTTCAAACTCACCTTTTCTTGGTGGATTTCTCCTATCTATACTCATCTTAAGCTCAAAAGATGTGGATTTGGAGGGCCACCCCCAACTTTTCCTCTTGGGAACATCCAAGAGATGAAAAAGAAGAACACTGTTACTTCTGTTACTTCTTCACTACTGCCCTCTAACCCCACCCATGATATACACTCTACTGTCTTCCCCTACTTTTCTCGCTGGCAAAACTCTCACGGGAAGGTTTTTATCTATTGGTTGGGTACAGAACCGTTTTTGTACATTGCTGATCCTGAGTTTCTGAAAAAAATGTCCACCGAGGTTTTAGCCAAGAAATGGGGAAAACCTAGAGTGTTCAGACATGACAGAGACCCTTTGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTCGTCACCGACATGTTATAGCACCGGCATTTTCTCCTCTTAACCTCAAGGCAATGGCAAGCATGATGAGTGAGTCTACAAATGAAATGATAGAAAGGTGGATTGCACGAATAAACTCGGGTAACTCAGAAATCGATGTGGAAAAAGAGGTTGTGGAAACTGCCGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGAAGAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGTCACTTTTCAGGACAACAAGATACGTAGGAGTCCCATTTGAGAAGTGTTTCAACGTGATGAAAACCCTAGAGGCCAAGAAACTTGGGAAAGAAATTGATCAACTTTTGCTATCCGTCATAACAAGTCGCATGAAATCGATCAAAAGACAAACTCAAGAAGACTTGCTAGGGTTGTTGTTGCAAGGAAATCATCAAGGTGATGAGAAGTTAGGGAAGACATTCACTACTAGAGATTTGTTGGATGAGTGCAAAACTTTCTTCTTTGCTGGCCATGAAACAACTGCATTGGCTATCTCATGGACCTTGTTGCTTCTTGCTATGCATGAAGATTGGCAAAACCAGTTAAGAGATGAGATCAGAGAAGTGGTCGGAGATAAAGAACTTGATATCAACGTGCTTGCTGGCTTGAAAAAGATGAAGTGGGTGATGAACGAAGTTTTAAGGCTCTACCCAACAGCACCAAATGTGCAAAGGCAAGCGAGAGAAGACATTCAAGTTGATAATTTAAGGATCCCTAATGGAACCAACATGTGGATCGATGTTGTCGCAATGCACCATGATCAAGCGTTGTGGGGAAAAGATGTGAATGAGTTTAGACCAGAGAGGTTCATGAACGATGTAAATGGTGGATGCAACCACAAAATGGGATATTTACCATTTGGGTTTGGAGGGAGAACGTGTGTTGGAAGAAACTTGAGCTTCATGGAGTATAAGATAGTGCTAACCCTACTTCTCTCTAGATTTAGCTTCAAAGTTTCACCAGGTTATAACCATTCACCCTCTATCATGCTCTCCCTTAGGCCAACCTATGGTCTACATCTCTTAGTTCAACCCCTTAATTAA 1560 0.4167 MEILGLPGTLAFFSFLPLLLLFKLTFSWWISPIYTHLKLKRCGFGGPPPTFPLGNIQEMKKKNTVTSVTSSLLPSNPTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKKWGKPRVFRHDRDPLFGNGLVMVEGNEWVRHRHVIAPAFSPLNLKAMASMMSESTNEMIERWIARINSGNSEIDVEKEVVETAGEIIAKTSFGMKGRNAKEVSEKLRALQMSLFRTTRYVGVPFEKCFNVMKTLEAKKLGKEIDQLLLSVITSRMKSIKRQTQEDLLGLLLQGNHQGDEKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHEDWQNQLRDEIREVVGDKELDINVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLRIPNGTNMWIDVVAMHHDQALWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRTCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHSPSIMLSLRPTYGLHLLVQPLN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2102g00001 519 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 SUPERFAMILY Cytochrome P450 80 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vium2102g00001 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 510 - -
Vium2102g00001 519 Pfam Cytochrome P450 85 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 Gene3D Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2102g00001 519 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2102g00001 Vium-Chr2102 25144 28512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2102g00001 13 518 Cytochrome P450 AT5G52400 59.136 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2102g00001 - - gmx:100810679 917.146