Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2092g00002 ATGAAAAGTGTGAAACACATGGTGGAATACTTGGTGAGGAAGAGCAGGGTGTTGCTTTATCAAGGTGAGTATGATTTGAGGGATGGAGTTGTCCAAACAGAGGTTTGGGTTAAGACAATGAAATGGGAAGGGATAGAAGAGTTTCTGAATGCTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGGTATGTTCAGTCTTGGAACTCTCTCACCAATGTTGTCGTTTTGGGAGCTGGCCATCTTCTTCCCACTGACCAACCTCTTCGTTCTCAAGCCATGATTGAAGATTGGGTTCTCCAAAAGGCTTTGTTTGAAAACTTTCGTAAGGCAAATGTATCAAGTAAGTCTATACTTGTTGAATAA 369 0.4173 MKSVKHMVEYLVRKSRVLLYQGEYDLRDGVVQTEVWVKTMKWEGIEEFLNAERKIWKVNGELAGYVQSWNSLTNVVVLGAGHLLPTDQPLRSQAMIEDWVLQKALFENFRKANVSSKSILVE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2092g00002 122 Gene3D alpha/beta hydrolase 1 106 IPR029058 -
Vium2092g00002 122 Pfam Serine carboxypeptidase 2 101 IPR001563 GO:0004185|GO:0006508
Vium2092g00002 122 SUPERFAMILY alpha/beta-Hydrolases 2 102 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2092g00002 1 105 Calmodulin-binding Proteins AT2G22960 23.585 1.96e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2092g00002 K09645 - vum:124829110 247.284