Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2079g00009 ATGGAAAAGTATATTGATATCTCACAAATTCAGCCTTACAAATGCAACAAGCGACTGGTTATTTCACTGAATCCTCTACCACATTCTGGTTCAACGGCAAACAATGAGGCATCATGCAATACTTGCAAAAGAAAATTGACTGAACCTGAATTATATCGCTATTGCTCCATTTCTTGCAAGGTTAGAGCTGTTTTAAGTAACCCTGATGATTCAACTCCTCCTTTCATTTCCATCCAGACTCCTCGTCTTCCCCCTCAGCAGGAAAAGCAAGAGGAAACTAATTCTGAACCTCAAAAGCCACAAAAGAGGAAAAGAAAGGGATCACCCCATAGAGCTCCCTTCTTCTGA 348 0.408 MEKYIDISQIQPYKCNKRLVISLNPLPHSGSTANNEASCNTCKRKLTEPELYRYCSISCKVRAVLSNPDDSTPPFISIQTPRLPPQQEKQEETNSEPQKPQKRKRKGSPHRAPFF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2079g00009 115 MobiDBLite consensus disorder prediction 70 91 - -
Vium2079g00009 115 Pfam PLATZ transcription factor 1 61 IPR006734 -
Vium2079g00009 115 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 114 - -
Vium2079g00009 115 MobiDBLite consensus disorder prediction 66 115 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium2079g00009 PLATZ 2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2079g00009 - - gmx:102660256 196.438