Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2074g00002 ATGTTTTCTCGAGGTCCAGTGCAGACTGTTCTTCATCCAAATAAGAGGCAAAGAACTGGTCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAGAAACTTCATGCTGAAGCATCTGATGAACAAAGGATTGCCAATGACCTTAAAAAAAATAAAAGAGAGGCAGAAGTCAAGCTTGAGGAACTTGACAAATATATGAGTTCTATTAAGAGACAATGTGTAAATGCAAGTAAAAGTTTTACTTCTAAGAAGCTAGCTTTGGAGGAAGAAATGCATCTGCACTCTGCTGAAAATAATGCAACGCCTTTGTCCTCTGTTGATGAGCTTGTTGAAGAAATTTCAGTTTGTTCTCTATCATCTATTTCATTCTTCAACTAA 375 0.3653 MFSRGPVQTVLHPNKRQRTGRLCGSFEDEIEKLHAEASDEQRIANDLKKNKREAEVKLEELDKYMSSIKRQCVNASKSFTSKKLALEEEMHLHSAENNATPLSSVDELVEEISVCSLSSISFFN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2074g00002 124 Coils Coil 30 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2074g00002 Vium-Chr2074 11872 13959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2074g00002 1 112 Structural Maintenance of Chromosomes family AT5G61460 46.429 1.55e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2074g00002 K22804 - vum:124829043 244.973