Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium2065g00016 | ATGGCGAAGGAAGGAGAGAAATGTAGTGAAGAGTTGTATGAGGTTCTGGGCATAGAAAAGGAGTGTAGCCCATCTGAACTCAAGAAAGCCTATAAGAAACTTGCACTGAGATGGCACCCAGATCGTTGTTCAGGGAGCCGCGAGGAAAAAGGGAAGGAGAAGTTCCAGGCAATCCAGCACGCCTATTCTGTCTTATCTGATGCCAACACAAGGTTACTGTACGAAGTAGGTGTCTATGACAGCGATGACGACCAAACCGGCATGGGTGATTTCTTGAATGAAATGGCCACAATGATGACTCAATCAAAACCCAGTGAGAATGGGGAGGAGAGTTTTGAGGAGTTCCAACAGCTCTTCGAAGAAATGTTTCAAGCCACTGCACCTGTTTCACCTACGTACATCATGACTAATGCTGAAGGTTCTAGATCAAATAAACGTAATTCCACTGAAATTAATTTTGGAAAGACAGACAATACATCTGAACTCAATTCGAGTGACCAGAACTTCTGTTTAGGGGGAGGTGGAGCAGCTCCAAGATATGGAGAAGGGAATTCCATGAGGAGGAGGTAG | 570 | 0.4509 | MAKEGEKCSEELYEVLGIEKECSPSELKKAYKKLALRWHPDRCSGSREEKGKEKFQAIQHAYSVLSDANTRLLYEVGVYDSDDDQTGMGDFLNEMATMMTQSKPSENGEESFEEFQQLFEEMFQATAPVSPTYIMTNAEGSRSNKRNSTEINFGKTDNTSELNSSDQNFCLGGGGAAPRYGEGNSMRRR | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium2065g00016 | 189 | ProSiteProfiles | dnaJ domain profile. | 11 | 78 | IPR001623 | - | |
Vium2065g00016 | 189 | MobiDBLite | consensus disorder prediction | 139 | 189 | - | - | |
Vium2065g00016 | 189 | ProSitePatterns | Nt-dnaJ domain signature. | 55 | 74 | IPR018253 | - | |
Vium2065g00016 | 189 | Gene3D | DnaJ domain | 8 | 131 | IPR036869 | - | |
Vium2065g00016 | 189 | Pfam | DnaJ domain | 12 | 74 | IPR001623 | - | |
Vium2065g00016 | 189 | SUPERFAMILY | Chaperone J-domain | 11 | 90 | IPR036869 | - | |
Vium2065g00016 | 189 | CDD | DnaJ | 11 | 67 | IPR001623 | - | |
Vium2065g00016 | 189 | PRINTS | DnaJ domain signature | 50 | 70 | IPR001623 | - | |
Vium2065g00016 | 189 | PRINTS | DnaJ domain signature | 31 | 46 | IPR001623 | - | |
Vium2065g00016 | 189 | PRINTS | DnaJ domain signature | 13 | 31 | IPR001623 | - | |
Vium2065g00016 | 189 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 1 | 149 | - | - | |
Vium2065g00016 | 189 | MobiDBLite | consensus disorder prediction | 139 | 170 | - | - | |
Vium2065g00016 | 189 | SMART | dnaj_3 | 10 | 70 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium2065g00016 | Vium-Chr2065 | 59837 | 62792 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium2065g00016 | 13 | 75 | C2H2 Transcription Factor Family | AT1G74250 | 46.970 | 3.56e-13 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium2065g00016 | - | - | lja:Lj3g3v2576120.1 | 214.542 |