Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2058g00001 ATGTCTATAATAGCAGAAGCACCTAAATTTCTTCAAGTTTACTCAAATGGTTCTGTGAAACGCTTCGACCCTGAAACTGCCTCAGCCTCCTTAGAATCAACCAATGGGTACAAATCAAAGGATGTGATCATAGACTCATCAAAAGGTATCACAGGAAGAATCTTCCTTCCAAGCTTTCCAACTTCCTCAAAGAAGCTTCCTCTCTTGGTTTATTTCCATGGTGGTGGCTTCTGCATTGGATCCACCGCATGGCTTGGCTACCACACTTTTCTTGGTGACTTCTGTGTCACATCTCAGTCCATTATCCTTTCTGTTGACTATCGTTTGGCTCCAGAACACCGTCTCCCTATTGCCTATGAAGATTGCTACGCCTCACTTCAATGGCTGAGTGAACAAGTTGGTTCTGAATCTTTGCTTCAACAAGCTGACACAACTAGGGTTTTTCTCTCAGGAGATAGTGCAGGAGGTAACATTGCACATCATGTTGCAGTGAAGGCAATTCAAAGCCCTGCATGCCCTTTGAGAATCACTGGGTTGATGCCAATACATCCCTATTTTGGAAGTGAGAAAAGGACCGTGAAAGAGATGGTTGATGAAAGCAAAGAGGATGTAACCATGAATGATATGTTTTGGAGGCTGAGTATACCAGAAGGCTCAAACCGTGACTACTATGGTTGTAACTTTGAAAAACATGACCTAGGTAACACTGTTTGGCTTAAATTTCCACCAACTGAGGTTTATGTTGCTGGTGAAGATTTTCTGAAGGAAAGAGGAGTGATGTATGTGGAGTTTCTAAAGAACAAAGGAGTGAAAAAAGTGACACTTGTGGAGGCAAAGGAAGAGTCTCATGTATTTCATGTATATCATCCTCAATCTTCTGCAGCTCGTTTACTGCAAACTCAAATGACTAGATTCATAGAAAAATATTAG 930 0.4161 MSIIAEAPKFLQVYSNGSVKRFDPETASASLESTNGYKSKDVIIDSSKGITGRIFLPSFPTSSKKLPLLVYFHGGGFCIGSTAWLGYHTFLGDFCVTSQSIILSVDYRLAPEHRLPIAYEDCYASLQWLSEQVGSESLLQQADTTRVFLSGDSAGGNIAHHVAVKAIQSPACPLRITGLMPIHPYFGSEKRTVKEMVDESKEDVTMNDMFWRLSIPEGSNRDYYGCNFEKHDLGNTVWLKFPPTEVYVAGEDFLKERGVMYVEFLKNKGVKKVTLVEAKEESHVFHVYHPQSSAARLLQTQMTRFIEKY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2058g00001 309 Pfam alpha/beta hydrolase fold 69 286 IPR013094 GO:0016787
Vium2058g00001 309 SUPERFAMILY alpha/beta-Hydrolases 37 309 IPR029058 -
Vium2058g00001 309 Gene3D alpha/beta hydrolase 7 307 IPR029058 -
Vium2058g00001 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 IPR033140 -
Vium2058g00001 309 PANTHER ARYLACETAMIDE DEACETYLASE 8 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2058g00001 Vium-Chr2058 14609 15552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2058g00001 3 305 Carbohydrate Esterase AT5G16080 36.392 7.17e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2058g00001 - - gmx:106796748 508.834