Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2045g00031 ATGTTCGCCCTCTCAACATTGGTTCTACTTTTCTGTGTCCTTTCTACTGTTGTTTGCTACGCATGGCTTTACTTCTTCAAACCCAACACTCAGAGGCTTCCACCGGGCCCATCGGGCCTCCCTTTCCTCGGGAACCTTCTATCTCTTGAACCGGAGCTTCACACTTACTTCGCCGCCTTGGCCCAGATCCACGGCCCAATCTACAAGCTCCGACTCGGGAGCAAGCTCGCCATCGTCATAGCTTCACCGGCCGTGGCTCGCGAGATCTTCAAAGACCACGACACTGTTTTCGCCAACCGCGACGTCCCAGCCGCCGGGAGGGTTGCCACGTACGGCGGTTTTGACATAGCGTGGAGACCCTATGGAGCCGAATGGCGGATGCTGAGGAAAGTCTGCACTGTGAACATGCTGAGCAACACCATCCTGGACTCCGTGTACGATCTCCGGCGCAACGAGGTGCGTAAAACGGTGTCGTATTTGTACAGTCGAGCGGGGAGTGCGGTGAACGTGGGGGAGCAGGGGTTTCTGACGGTGATGAATGTGATAACTAGTATGATGTGGGGCGGGGCGGTGGAAGGGGCGGAGAGGGAAACTTTGGGGGCGGAGTTCAGGGAGTTGGTGGCGGAGACGACGCAGCTTCTGGGGAAGCCGAATGTGTCGGATTTTTTTCCCAGGTTGGCGCGGTTCGATTTGCAAGGTGTGGAGAAAGAGATGAACGTGTTGGTGTCACGGTTCGATGGGATATTTGAAAAGATGATTGGTGAACGAGTGAAGGTGGGTGAAGAAAAGGATGGGAAGAAGAAAGAAAGGAAGGATTTTCTGCAGTTTCTGTTGGATCTTAAGGATTCCGAAGACGTTGATTCGAAGACGCCATTCACCATGACCCACCTCAAGGCCTTACTCATGGATATGGTTACAGGGGGAACCGATACATCGTCCAACACAATTGAGTTTGCAATGGCAGAAATAATGCAGAAGCCAGAAGTAATGAAGAAAGTCCTAGAAGAGTTGGAAGTTGTGGTTGGAAAAGATAAAATGGTAGAAGAGTCTGACATTCGTAAGTTGCATTACTTGCAAGCTGTGATGAAAGAAACTCTTCGATTGCATCCTGCACTTCCACTTCTAGTCCCACATAGCCCAAGTCAAACCACCAATGTGGGAGGCTACACCATCCCAAAGGGTTCTCGAGTCTTCGTCAATGTTTGGGCCATTCATAGAGATCCTTCCATTTGGGAAAGACCACTGGAATTTGACCCTTCAAGATTCTTAGATGCAAAGTGGGATTTCAGTGGAAATGAGTTCAGTTATTTCCCATTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGAACAGTTCTGTATCTTCTGGCAACACTTGTACACTTATTCGATTGGACAATACCACAAGGAGAGGAGTTAGATGTATCAGAGAAATTTGGTATTGTTCTAAAAAAGAAAACACCTCTGGTTGCCATCCCCACCCCGCGCTTCTCCAACCCACACCTTTACAATTTAATATAA 1533 0.4925 MFALSTLVLLFCVLSTVVCYAWLYFFKPNTQRLPPGPSGLPFLGNLLSLEPELHTYFAALAQIHGPIYKLRLGSKLAIVIASPAVAREIFKDHDTVFANRDVPAAGRVATYGGFDIAWRPYGAEWRMLRKVCTVNMLSNTILDSVYDLRRNEVRKTVSYLYSRAGSAVNVGEQGFLTVMNVITSMMWGGAVEGAERETLGAEFRELVAETTQLLGKPNVSDFFPRLARFDLQGVEKEMNVLVSRFDGIFEKMIGERVKVGEEKDGKKKERKDFLQFLLDLKDSEDVDSKTPFTMTHLKALLMDMVTGGTDTSSNTIEFAMAEIMQKPEVMKKVLEELEVVVGKDKMVEESDIRKLHYLQAVMKETLRLHPALPLLVPHSPSQTTNVGGYTIPKGSRVFVNVWAIHRDPSIWERPLEFDPSRFLDAKWDFSGNEFSYFPFGSGRRICAGIAMAERTVLYLLATLVHLFDWTIPQGEELDVSEKFGIVLKKKTPLVAIPTPRFSNPHLYNLI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2045g00031 510 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 CDD CYP76-like 61 497 - -
Vium2045g00031 510 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 FunFam Cytochrome P450 - like protein 23 494 - -
Vium2045g00031 510 PANTHER OS08G0547900 PROTEIN 7 508 - -
Vium2045g00031 510 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2045g00031 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2045g00031 Vium-Chr2045 269998 276131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2045g00031 11 507 Cytochrome P450 AT4G12300 60.000 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2045g00031 - - vra:106769527 786.178