Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2045g00002 ATGCACGAAAGATGCCATTTAGAAAGTGTGGCTTCACCGGAGCCGGTGGTTTTAGAGAAAAGGTTCGCGCGGTTAGAGGCGGGGGATGAAACACTCAAGCATTCTACAAAACAACGTTCCCGCGTAGTAGTGCCAGCAGCGCGTACTCGAAATAACTTGCGTCCTGCAAGCAATCACGACATTGAGGAGAACGCTCGAAATCTTCTCAACTTCGTTAAAGGATCAAATCCACAGAACACTTTGATACTTAAGGCAGAGAACCTGCTGTTTGATTACTTCAAGAAGAGTGTTGGAGAATGTAAAGAAATTGATCTGTCAAAAAAGCTTCACCTTTGCAAGGTAGCAGAGGATTGGATAAACGGGCGACCCCAAGAACTGTATTTGGATTGGGAAGAACAAGGACGAAGGTCTGTGTATGTTAGGGAGATGGACAGATGTGAAGGGTGGAAAAACTATGATCAAGAAATACAACAATTGGGTGGGGACCTGGCAAACGAAGTCTTGACAATTCTGGTTAATGAGTCAGTGCTTGATCTTATGATACGTGCCAGCCACTGA 558 0.4498 MHERCHLESVASPEPVVLEKRFARLEAGDETLKHSTKQRSRVVVPAARTRNNLRPASNHDIEENARNLLNFVKGSNPQNTLILKAENLLFDYFKKSVGECKEIDLSKKLHLCKVAEDWINGRPQELYLDWEEQGRRSVYVREMDRCEGWKNYDQEIQQLGGDLANEVLTILVNESVLDLMIRASH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2045g00002 185 PANTHER OS04G0572500 PROTEIN 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2045g00002 Vium-Chr2045 5729 6756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2045g00002 85 181 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 37.755 8.62e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2045g00002 - - vum:124828956 377.096