Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2045g00001 ATGTGCCCATCCACTCCTATTGTCAGAATTCCAGCATTAATAAAACTGTCAGTTGTATCTAAAAAAGCTTTGATAATGAAAACGAGACTGATTAGCGAAATGGATCTTGTGAAACAGGAATACTGGGCAAATGAGAAAGAACAGTTTAGTCCTGTATCGATACTAGATTGTCCATTTGTAGATGAAGAAGAGATTTACAAGCGTCGTTTCAGATCCACTTCCTCTGTTGTTTCCATCACGGAAGGAAGGAAACACAAGCATATGCACGAAAGATGCCATTTAGAAAGTGTGGCTTCACCGGAGCCGGTGGTTTTAGAGAAAAGGTTCGCGCGGTTAGAGGCGGGGGATGAAACACTCAAGCATTCTACAAAACAACGTTCCCGCGTAGTAGTGCCAGCAGCGCGTACTCGAAATAACTTGCGTCCTGCAAGCAATCACGACATTGAGGAGAACGCTCGAAATCTTCTCAACTTCGTTAAAGGATCAAATCCACAGAACACTTTGATACTTAAGGCAGAGAATCTGCTGTTTGATTACTTCATGAAGAGTGTTGGAGAATGTAAAGAAATTGATCTGTCAAAAAAGCTTCACCTTTGCAAGGTAGCAGAGGATTGGATAAACGGGCGACCCCAAGAACTGTATTTGGATTGGGAAGAACAAGGACGAAGGTCTGTGTATGTTAGGGAGATGGACAGATGTGAAGGGTGGAAAAACTATGATCAAGAAATACAACAATTGGGTGGGGACCTGGCAAACGAAGTCTTGACAATTCTGGTTAATGAGTCAGTGCTTGATCTTATGATACGTGCCAGCCACTGA 819 0.4274 MCPSTPIVRIPALIKLSVVSKKALIMKTRLISEMDLVKQEYWANEKEQFSPVSILDCPFVDEEEIYKRRFRSTSSVVSITEGRKHKHMHERCHLESVASPEPVVLEKRFARLEAGDETLKHSTKQRSRVVVPAARTRNNLRPASNHDIEENARNLLNFVKGSNPQNTLILKAENLLFDYFMKSVGECKEIDLSKKLHLCKVAEDWINGRPQELYLDWEEQGRRSVYVREMDRCEGWKNYDQEIQQLGGDLANEVLTILVNESVLDLMIRASH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2045g00001 272 PANTHER OS04G0572500 PROTEIN 43 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2045g00001 Vium-Chr2045 7 2133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2045g00001 45 268 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 29.832 2.35e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2045g00001 - - vum:124828955 547.354