Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2036g00002 ATGTTCCATCTAACACTACTCATTCTCCTAGCCACCCTAGTCTCATTAATCTACATCCTACGCACCACCGCGTCACGACGGAGACAGCCACCGCCTCCTCCGGGGCCGCCGCGGTTACCGATAATCGGAAACCTCCACATGATGGTAGGAGGAAGAGAAGCACTCCTACATCGTTCGCTCCAATCCCTATCCCAACGTTACGGTCCTATAATGTCGTTACAACTGGGAACCGTTCCGACCGTTGTGGTCTCGTCTCCGGAGGCCGCGGAACTGTTCCTCAAAACCCACGACGCTGTGTTCGCGAACAGGCCCAAGTTCGAAGCGGCCCAATACACGTACGGCCCAGAGAGCGTGGCGTTTGCAGAGTACGGCGCGTACTGGCGCGGCGTGAGGAAGGTGTGCACCACGCACCTGCTGAGCGCGTCGAAGGTGGAGCGGTTTGCGCCTTTGAGAAAGAGGGAGATTGGGGCGATGGTGGAGTGGTTGAGGGAAGCAGCGGCGGCGCGTGAGGTTGTGAACCTAAGTGAGCGAGTGGGGGAAGTTTTGATTGACATGGCATGTAAGATGGTGCTGGGAAGGAACAAGGATCATAGATTTGACTTGAAAGGGATTCTTTTGGAGACCATGAGTGTTTCAGGAGCTTTCAATTTGGCAGATTATTTGCCTTGGTTTCGACCCTTTGATCTTCAGGGATTGACACAACGATCAAAGAAAATCAGTAAAGCGCTTGATGAAATGTTGGAGGAGATTATCGAAGAACACGAAGGGGTTCCTAAAGCAGAAGGGCACCTCAACGATTTCATTGACACACTACTTTCGTTGAAAGACCAACCAATGCATCGACATGTTGAAGATGCACCTGTGATCGATAAAAGAAGCATAAAGGGTATTGTGTTCGACATGGTAATTGGTGCATCAGAAACTTCGAGCAACGTGATTGAATGGGCCATTTCAGAACTGGTGCGACATCCAAGAGTGATGGAAAGTGTGCAAGACGAGCTGAAAGATGTGGTTGGAATGAAGAAGATGGTGGAGGAGATTGATTTGGCAAAACTAAGTTATCTGGATATGGTTGTGAAGGAGACCCTAAGGCTTCACCCTGCTGTGCCCTTACTAGCACCTCATGAATCAATGGAGGATATAGTGATAGAAGGCTATTACATCAAGAAGAAGTCACGAATAATAATAAATGCATGGGCCATAGGGAGAAACCCTACAGTGTGGTCGGAAAATGCTGATGTGTTTTACCCTGAAAGATTTGTTGACAGCAACATAGATTTTAAGGGACAAGACTTTGAACTTATACCGTTTGGGTCTGGTCGGAGAAGCTGCCCAGGAATGGTGATGGGTTTGAGCATAGTTAAATTGGTTATAGCACAGTTGGTGCACTGCTTCAACTGGGAGTTACCTGATGGCATTGCTAACCATGAATTAGATATGAACGAGAAATCAGGCTTATCAATGCCACGAGCAACACCTTTGCTTCTCATTCCAACTTATCGTCTACTTTATCAAACTTTTGTGAATTAA 1530 0.4784 MFHLTLLILLATLVSLIYILRTTASRRRQPPPPPGPPRLPIIGNLHMMVGGREALLHRSLQSLSQRYGPIMSLQLGTVPTVVVSSPEAAELFLKTHDAVFANRPKFEAAQYTYGPESVAFAEYGAYWRGVRKVCTTHLLSASKVERFAPLRKREIGAMVEWLREAAAAREVVNLSERVGEVLIDMACKMVLGRNKDHRFDLKGILLETMSVSGAFNLADYLPWFRPFDLQGLTQRSKKISKALDEMLEEIIEEHEGVPKAEGHLNDFIDTLLSLKDQPMHRHVEDAPVIDKRSIKGIVFDMVIGASETSSNVIEWAISELVRHPRVMESVQDELKDVVGMKKMVEEIDLAKLSYLDMVVKETLRLHPAVPLLAPHESMEDIVIEGYYIKKKSRIIINAWAIGRNPTVWSENADVFYPERFVDSNIDFKGQDFELIPFGSGRRSCPGMVMGLSIVKLVIAQLVHCFNWELPDGIANHELDMNEKSGLSMPRATPLLLIPTYRLLYQTFVN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2036g00002 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vium2036g00002 509 Gene3D Cytochrome P450 18 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 CDD CYP71-like 66 494 - -
Vium2036g00002 509 FunFam Cytochrome P450 83B1 19 497 - -
Vium2036g00002 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PANTHER CYTOCHROME P450 93A3-LIKE 6 502 - -
Vium2036g00002 509 Pfam Cytochrome P450 33 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00002 509 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2036g00002 Vium-Chr2036 10291 12034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2036g00002 4 499 Cytochrome P450 AT3G48280 37.952 8.47e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2036g00002 - - gmx:100798918 781.556