Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2036g00001 ATGTTTCCTGAAACAGTAGCTATTCCTGCAATACTCCTTGTGGTATTCATATTTGTGGTATCATTTGCTGTGTTGAAAGCAAAACAAGGCCAAGATAATGAAAAACATCCACCTGGTCCCAAGCCCCTGCCAATTATTGGTCATCTCCACATGCTAGGGAAATTACCACACCGCACCCTTCAATCCCTTGCAGCAGAATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTCCAACCATTGTGATATCTTCACCAGAAATAGCTGAACTATTCCTCAAGACTCATGACATTACTTTTGCTTCCAGGCCTAAAAGCATCTCATCCCACTATATTTCCTATGGTGGTAAAGGCTTAGTTTTTTCTGAGTATGGCCCCTACTGGCGCAACATGAGGAAACTCTGCACAGTACAACTTCTGATTGCATCAAAAGTTGAGATGTTTTCTCCTTTGAGAAGTGAGCTGTTGGCAGAGTTTGTCTGCTTTCTGCAGAAGACAGCATCATCACATGAGGTTACGGATGTCAGTGATACTGTAGGGGATCTCATTGAGAATCTCACCTTTAAAATGATCTTTGGTCGCAGTAAGGACGATAGATTCGATGTAAAGAACCTTGTTCGTGAAGTACTGAACTTGGCAGGAACTTTCAATGTTGCAGATTATTTGCCTTGGCTACGCATGTTTGATCTTCAGGGGCTGGTAAAACGATTAAAGAAAGTGTGTAAATCATTTGACGTAGTAATGGAGCAGATTATCAAAGACCACGAACAGGATTCTGATAAAGAACAAAAGGGCCAAAAGGATTTTGTGGACATATTACTTGCACTTCTGCATCAACCCCTGGATCCTCAGGATGAACATGGTCCTGTGATTGAAAGAACACATATCAAGGCTATTGTGATGACTATGATTATTGCAGGAGTTGACACATCTGCCACAACGGTTGAGTGGGCCATGTCAGAACTCTTAAAGCATCCAAGGGTGATGAATAAACTTCAAGCTGAGTTGGAAAGTGTGGTGGGGATGAATAGAAAAGTGGAGGAAACTGATATTGTAAAGTTGACTTATTTGGACTTAGTTGTGAATGAGACACTAAGGTTGTACCCTGTTGCACCTTTGCTGGTACCTCGTGAGTGTAGAGAAGATGTTACTATAGATGGTTACTGCATAAAGAAAAAGACAAGGGTGATAGTGAATGCATGGGCTTTGGGGAGAGATTCTAAAGTTTGGTCAGATAATGCTGAGGAGTTTTGTCCCGAAAGATTTTCCAACAGCAATGTTGATATAAAAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTCACCACTGCTAAGATTGTTCTGGCTCAATTGGTTCATTGCTTCAATTGGGAGCTTCCTTTGGGCATGTCCCATGATGAATTGGACATGACTGAGAAATTTGGTCTTACAATGCCAAGAAGTAAGCATTTGCTAGCTGTGCCAACTTATCGTCTAGCAGATGAACCACCGCCTCCTCCGGGGCCGCCGCGGTTACCGATAATCGGAAACCTCCACATGATGGTAGGAGGAAGAGAAGCACTCCTACATCGTTCGCTCCAATCCCTATCCCAACGTTACGGTCCTATAATGTCGTTACAACTGGGAACCGTTCCGACCGTTGTGGTCTCGTCTCCGGAGGCCGCGGAACTGTTCCTCAAAACCCACGACGCTGTGTTCGCGAACAGGCCCAAGTTCGAAGCGGCCCAATACACGTACGGCCCAGAGAGCGTGGCGTTTGCAGAGTACGGCGCGTACTGGCGCGGCGTGAGGAAGGTGTGCACCACGCACCTGCTGAGCGCGTCGAAGGTGGAGCGGTTTGCGCCTTTGAGAAAGAGGGAGATTGGGGCGATGGTGGAGTGGTTGAGGGAAGCAGCGGCGGCGCGTGAGGTTGTGAACCTAAGTGAGCGAGTGGGGGAAGTTTTGATTGACATGGCATGTAAGATGGTGCTGGGAAGGAACAAGGATCATAGATTTGACTTGAAAGGGATTCTTTTGGAGACCATGAGTGTTTCAGGAGCTTTCAATTTGGCAGATTATTTGCCTTGGTTTCGACCCTTTGATCTTCAGGGATTGACACAACGATCAAAGAAAATCAGTAAAGCGCTTGATGAAATGTTGGAGGAGATTATCGAAGAACACGAAGGGGTTCCTAAAGCAGAAGGGCACCTCAACGATTTCATTGACACACTACTTTCGTTGAAAGACCAACCAATGCATCGACATGTTGAAGATGCACCTGTGATCGATAAAAGAAGCATAAAGGGTATTGTGTTCGACATGGTAATTGGTGCATCAGAAACTTCGAGCAACGTGATTGAATGGGCCATTTCAGAACTGGTGCGACATCCAAGAGTGATGGAAAGTGTGCAAGACGAGCTGAAAGATGTGGTTGGAATGAAGAAGATGGTGGAGGAGATTGATTTGGCAAAACTAAGTTATCTGGATATGGTTGTGAAGGAGACCCTAAGGCTTCACCCTGCTGTGCCCTTACTAGCACCTCATGAATCAATGGAGGATATAGTGATAGAAGGCTATTACATCAAGAAGAAGTCACGAATAATAATAAATGCATGGGCCATAGGGAGAAACCCTACAGTGTGGTCGGAAAATGCTGATGTGTTTTACCCTGAAAGATTTGTCGACAGCAACATAGATTTTAAGGGACAAGACTTTGAACTTATACCGTTTGGGTCTGGTCGGAGAAGCTGCCCAGGAATGGTGATGGGTTTGAGCATAGTTAAATTGGTTATAGCACAGTTGGTGCACTGCTTCAACTGGGAGTTACCTGATGGCATTGCTAACCATGAATTAGATATGAACGAGAAATCAGGCTTATCAATGCCACGAGCAACACCTTTGCTTCTCATTCCAACTTATCGTCTACTTTATCAAACTTTTGTGAATTAA 2964 0.4474 MFPETVAIPAILLVVFIFVVSFAVLKAKQGQDNEKHPPGPKPLPIIGHLHMLGKLPHRTLQSLAAEYGPIMSLKLGQVPTIVISSPEIAELFLKTHDITFASRPKSISSHYISYGGKGLVFSEYGPYWRNMRKLCTVQLLIASKVEMFSPLRSELLAEFVCFLQKTASSHEVTDVSDTVGDLIENLTFKMIFGRSKDDRFDVKNLVREVLNLAGTFNVADYLPWLRMFDLQGLVKRLKKVCKSFDVVMEQIIKDHEQDSDKEQKGQKDFVDILLALLHQPLDPQDEHGPVIERTHIKAIVMTMIIAGVDTSATTVEWAMSELLKHPRVMNKLQAELESVVGMNRKVEETDIVKLTYLDLVVNETLRLYPVAPLLVPRECREDVTIDGYCIKKKTRVIVNAWALGRDSKVWSDNAEEFCPERFSNSNVDIKGFDFRLIPFGSGRRGCPGIHLGLTTAKIVLAQLVHCFNWELPLGMSHDELDMTEKFGLTMPRSKHLLAVPTYRLADEPPPPPGPPRLPIIGNLHMMVGGREALLHRSLQSLSQRYGPIMSLQLGTVPTVVVSSPEAAELFLKTHDAVFANRPKFEAAQYTYGPESVAFAEYGAYWRGVRKVCTTHLLSASKVERFAPLRKREIGAMVEWLREAAAAREVVNLSERVGEVLIDMACKMVLGRNKDHRFDLKGILLETMSVSGAFNLADYLPWFRPFDLQGLTQRSKKISKALDEMLEEIIEEHEGVPKAEGHLNDFIDTLLSLKDQPMHRHVEDAPVIDKRSIKGIVFDMVIGASETSSNVIEWAISELVRHPRVMESVQDELKDVVGMKKMVEEIDLAKLSYLDMVVKETLRLHPAVPLLAPHESMEDIVIEGYYIKKKSRIIINAWAIGRNPTVWSENADVFYPERFVDSNIDFKGQDFELIPFGSGRRSCPGMVMGLSIVKLVIAQLVHCFNWELPDGIANHELDMNEKSGLSMPRATPLLLIPTYRLLYQTFVN 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2036g00001 987 PRINTS E-class P450 group I signature 922 945 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 542 561 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 566 587 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 791 817 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 912 922 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 771 788 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS E-class P450 group I signature 834 852 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 CDD CYP71-like 66 496 - -
Vium2036g00001 987 SUPERFAMILY Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 CDD CYP71-like 544 972 - -
Vium2036g00001 987 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vium2036g00001 987 PANTHER CYTOCHROME P450 93A3-LIKE 12 505 - -
Vium2036g00001 987 Coils Coil 707 727 - -
Vium2036g00001 987 FunFam Cytochrome P450 83B1 503 975 - -
Vium2036g00001 987 SUPERFAMILY Cytochrome P450 511 979 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 915 924 IPR017972 GO:0005506|GO:0016705
Vium2036g00001 987 Gene3D Cytochrome P450 499 973 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 Coils Coil 329 349 - -
Vium2036g00001 987 Pfam Cytochrome P450 511 968 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2036g00001 987 FunFam Cytochrome P450 83B1 23 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2036g00001 Vium-Chr2036 2998 8596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2036g00001 511 977 Cytochrome P450 AT3G26300 38.655 8.22e-110 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2036g00001 - - gmx:100798918 1605.88