Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2035g00001 AGCGATGGACTCAAAGGTTTGTTTGAATTGACCCCTTCACAGATTCAAAAGCTCAAACAATACGGAAACTCAAAGGTCAAAGTGGCTGTTCTTCTGTCAACATTTTCTGTTACGTGTGCGTATGTGTTAGCGTGTTGGGTCAAAGCGAACCAAGTGAAGGATGAAAATGTGCTGTGCATATTTTCTGTTGACTGTAGAACGCGCTTGGATCCTCCAATTCCAGCCACGTATTTTGGAAACTGCGTTAAAGGAGAATTCGTTGTGGCTTTGACTAAGGAGTTGATTGGAAAAGATGGGTTCATTTGTGCTTTGGAGAGGATAGTTGAGGCTTTGAATAGGGTGAAGGAAGAGGGAGTTTTGAATGGAGCAGAAAAATGGGTTTCGAGTATGCATGACCCTTGGGAGGGTAGAATTATTTCTACTGTTGGGTCTCCGTTGTTTGAGGTTTATAGCATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGTTATCCACAGACAAAACAGGAGCATTTTCTCTCAGTGAAAGTAGGGATATCAGTGGAGGAATTGAGATTGGATTGCTGTTAAGTAAAAGTGAGATGGAAGATTTTACTTCCCTTTTTCTTCAAGGACTTGATTCCCTTTAG 633 0.4186 SDGLKGLFELTPSQIQKLKQYGNSKVKVAVLLSTFSVTCAYVLACWVKANQVKDENVLCIFSVDCRTRLDPPIPATYFGNCVKGEFVVALTKELIGKDGFICALERIVEALNRVKEEGVLNGAEKWVSSMHDPWEGRIISTVGSPLFEVYSIDFGWGRPKKVDMLSTDKTGAFSLSESRDISGGIEIGLLLSKSEMEDFTSLFLQGLDSL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2035g00001 210 PANTHER - 6 209 - -
Vium2035g00001 210 SUPERFAMILY CoA-dependent acyltransferases 32 207 - -
Vium2035g00001 210 Gene3D - 2 210 IPR023213 -
Vium2035g00001 210 Pfam Transferase family 9 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2035g00001 Vium-Chr2035 5 718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2035g00001 7 205 Monolignol Biosynthesis Gene Families AT5G48930 24.651 1.08e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2035g00001 - - vum:124828884 422.55