Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2011g00004 ATGATGGAAATTGAGATTGGAAGTGGGTGGATACTTCACGAGCGCTGTAAGGTGTATCTGTTTGTTTCTCTGAACAGGGTTGCTGGGTGTCTCGTTGCGGAACCAATTGAAAAGGCATTCAGAGTTGTGTCTGGCTCTGTTACTGGATCTGTTCACAGTGCGAAGAAAAGGGGAGTAACGACACGCTCTACCACTCTTCAATTTGGGAATGTTATTTTCCAAAGGGAGGTCCATAGAAAAGTTGCTAATGTGAGTGATTCTGAAAAGATGGAAGGGGCAATCTTCTGTACCAGCGAACCAACCGCTGCTGCTGGTGGCATTAGGGCCATTTGGGTTACTCCCTCCAACAGAAGAAAAGGCATTGCCACCCAGTTGCTAGAAGCAATGAGGAAGAGTTTCTGCCCCGGTCTTGAGCTTGAACGTTCTCAGTTAGCATTTTCCCAGCCTACCTCTGCTGGAAAGGCATTAGCAGCTAGTTATACTGGCACTGGTTCATTCTTAGCATATTAG 510 0.4667 MMEIEIGSGWILHERCKVYLFVSLNRVAGCLVAEPIEKAFRVVSGSVTGSVHSAKKRGVTTRSTTLQFGNVIFQREVHRKVANVSDSEKMEGAIFCTSEPTAAAGGIRAIWVTPSNRRKGIATQLLEAMRKSFCPGLELERSQLAFSQPTSAGKALAASYTGTGSFLAY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2011g00004 169 Gene3D - 17 145 - -
Vium2011g00004 169 Pfam ESCO1/2 acetyl-transferase 103 169 IPR028009 -
Vium2011g00004 169 PANTHER N-ACETYLTRANSFERASE ECO 1 169 - -
Vium2011g00004 169 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 85 131 IPR016181 -
Vium2011g00004 169 CDD NAT_SF 93 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2011g00004 Vium-Chr2011 20838 22815 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium2011g00004 Acetyltransf_13 3.1e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2011g00004 K11268 - gmx:100811441 256.144