Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2009g00005 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTTCTCACCAAAGGGTGCCCACAATGGCCAACTTCACACCCACAACCTCATCCACCACCACCACCGTCGCCGCCGCCGCCACCACCACGGCTCCCTCCCAACCCTCATGGGTCGACGAATTCCTTGACTTCTCCTCCACCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGACGACATTTCAGCAGCGGCACTACCGCCGCCACCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGNACTAA 453 0.5894 MAQLPPKIPTIPQNWPSFSHQRVPTMANFTPTTSSTTTTVAAAATTTAPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDISAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMTLDLKPKX 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2009g00005 150 MobiDBLite consensus disorder prediction 106 150 - -
Vium2009g00005 150 PANTHER BASIC LEUCINE ZIPPER 34 1 142 - -
Vium2009g00005 150 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2009g00005 Vium-Chr2009 139800 140858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2009g00005 1 139 bZIP Transcription Factor Family AT3G58120 48.408 4.83e-30 108