Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2007g00002 ATGGGTGTGTCGCAAAAATGGTTCAGAATTCTTCGCGGAAGATTCATCAGATCATCCAACAAAGACATCATTCTCCCACGCACAAGTATTTGCACTAACGAATGCGAAGAAGCCATACTCAGGAATGAAGACTTCAGTTTCCCTACACAAACACCAACACATGTTTCTGCAATCACCAAGGAAGATGTTGCGGCCATTAAGATCCAAGCTTTTTTCAGGGGACATCTAGCAAGAAGAGCATATAAAGCATTAAAAGGGCTAGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGCTACTCGGTAGCTTTGATAAGAAATCAACCATCAACTGA 411 0.438 MGVSQKWFRILRGRFIRSSNKDIILPRTSICTNECEEAILRNEDFSFPTQTPTHVSAITKEDVAAIKIQAFFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGSFDKKSTIN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2007g00002 136 PANTHER IQ-DOMAIN 5-RELATED 54 125 - -
Vium2007g00002 136 SMART iq_5 60 82 IPR000048 GO:0005515
Vium2007g00002 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 105 IPR027417 -
Vium2007g00002 136 ProSiteProfiles IQ motif profile. 85 112 IPR000048 GO:0005515
Vium2007g00002 136 Gene3D - 59 112 - -
Vium2007g00002 136 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
Vium2007g00002 136 Pfam IQ calmodulin-binding motif 88 102 IPR000048 GO:0005515
Vium2007g00002 136 Pfam IQ calmodulin-binding motif 64 82 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2007g00002 Vium-Chr2007 8261 9221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2007g00002 1 127 IQD Protein Family AT3G51380 48.819 1.12e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2007g00002 - - vun:114179724 233.802