Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium199g00005 ATGAAGTTCTTAGCTATGGAGGAAGCAAGAAGTGTGAAAGTTGTTGAAGTTTGCAGTGTGGCACCATCAGAGGCAGCAGCAACAACCAATTGCTCCACTCCGACATCTTTGTCTCTAACATTCTTTGACCTACTATGGTTAAGGAGTCCCCCAGTCGAACGTGTTTTCTTCTATGAACTTCCCAACACAACCATCTCCTTCTTTGACACCATTCTTCCCAATCTCAAACACTCTCTTTCTCTCACACTCCAACACTTTCTTCCTCTTGCTGGCACCATCACATGGCCCCTTGAATCTCCACACCCCATCATCAACTATGTCCCAGGCAATGCCGTTTCCTTCACCATAGCTGAATCCACCACTGATTTCAACATGCTTTGTTCCAATACCTGTCAGGCTTCTCTTCTCCATCATCTGATACCCCACTTGCCCACTTCCGATGAACAAGCATCTGTGATGGCCCTCCAGGTTACCCTTTTTCCTGGTTCTGGTTTTTCCATCGGAATAGCCACACACCATGCAGCCACGGATGGGAAAGCCACGACTTTGTTTCTCAAAGCATGGGCCTATGTTTGCTCCAATAACTTCACAGAATCATCTTTTTCGTCGTTGCCAAAACACCTCACGCCATTCTATGACAGGTCAACGATAAACGACACCGAAGGAATCGGTGCGAGGTGTTTGAAGAATTGGTTGAACATCGGTGGACCAAACAATAGGAGCATGAAGGTGTGGGATCTTGGAGGTGTAAATGCAATGTCAGCCGAATCAGTCAGAGGGTCGTTCGAGTTAACCTCTTCAAACATCCGACAACTGAAGCAACATGCAAAATCTAAGCTCGGTGAGAATGCTCATGTGTCAACATATTTGGTTGCGTGTGCTTATGTGTTGCAGTGTTTGGTGAAGGCAGAACAACCTAAGACTGATGGAGTGGCCTTTTTGTTCAGTGTGGACTGTAGGACTCGTATGAAGACACCCATTTCCTCCACGTATTTTGGAAACTGTATCATTGGTCATAAGGTTATGGACGGAACAAGGAAATTGTTAGGAGATGATGGTTTCCTCAATGGTGTTGAAGGGATGAATGAAGCTTTGAAGAAGTTGGAGGATGGGGTGTTTAGTGAGGCAGTGAATATGTCTACAATTATGAAAATTGCGAGGGATAATCGAATACTTACAACTGCAGGATCACCACGATTTGAGGTATATAGTATTGATTTTGGATGGGGAAGGCCAATGAAGGTGGATATGACATCCATAGGCAAAACTGGAGCATTCTGTCTTTCTGAAAGTAGGAATGAGAATGGAGGAATTGAGATTAGTTTGGTGTTGAAGAAGCAAGAAATGGAAACTTTCGTTGCTCATTTTAATCAAGGTCTTCAATCCCTTTAA 1392 0.4425 MKFLAMEEARSVKVVEVCSVAPSEAAATTNCSTPTSLSLTFFDLLWLRSPPVERVFFYELPNTTISFFDTILPNLKHSLSLTLQHFLPLAGTITWPLESPHPIINYVPGNAVSFTIAESTTDFNMLCSNTCQASLLHHLIPHLPTSDEQASVMALQVTLFPGSGFSIGIATHHAATDGKATTLFLKAWAYVCSNNFTESSFSSLPKHLTPFYDRSTINDTEGIGARCLKNWLNIGGPNNRSMKVWDLGGVNAMSAESVRGSFELTSSNIRQLKQHAKSKLGENAHVSTYLVACAYVLQCLVKAEQPKTDGVAFLFSVDCRTRMKTPISSTYFGNCIIGHKVMDGTRKLLGDDGFLNGVEGMNEALKKLEDGVFSEAVNMSTIMKIARDNRILTTAGSPRFEVYSIDFGWGRPMKVDMTSIGKTGAFCLSESRNENGGIEISLVLKKQEMETFVAHFNQGLQSL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium199g00005 463 Gene3D - 254 463 IPR023213 -
Vium199g00005 463 Gene3D - 11 242 IPR023213 -
Vium199g00005 463 Pfam Transferase family 33 457 - -
Vium199g00005 463 PANTHER - 11 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium199g00005 Vium-Chr199 69019 70488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium199g00005 55 452 Monolignol Biosynthesis Gene Families AT5G48930 23.131 5.12e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium199g00005 - - vra:106767538 870.922