Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium199g00001 ATGTCTAAAAAGGTCTTCACAATGAAGGATGAAAATCCAGAATTGCAGAAGCAAATTGGGTGCATCAGTGGCTTTTTTCAGCTTTTTGACCGCCACAGGTTCCTCACAGCCCAACAAGGTAGCAGCCACAATCAGAACATACAAACTAAAGGTGGAACAAGGAACCAGATGAAAGAGGTGAATAATACAACTCAAATGGCAATGGGAAAGAATGTGAAGGTTGCAGGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCTTCTCGTTCATCTAGCATGTCATCCCTGGAGTTCAGCAGAGCAATTCAGATAGAACCACCATCAATAATCAGTCCAATGAAAATTCCAGAGAATTCTAATCCAGAAATAGAAGTGAAGCAACATGGCAACAAAGGCCCTCACTCCCTTGATTTCTATGACATTGTGAAAGATTCAATGCATAGAGATGTTCAAGGATTGTCTGTAAAAATTGTGGCTAAAGGGGAAAAGAAAGGTAGAATCTTGAAACACGTTGATTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTAAATATGGTTGCTTGGGATTCACCGAGACTCTCTTATGACGGGAGGGACACACAAGATTCATTAAAGTCTGCTAGAAAACCTAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGTTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAAAAACCTTCCCAGAAAGTACAGAAGCATGTGATACTCAACCACGGATATATTCCAGCAAAAATGAGTCAGATGCAGAATCTTGCACAAATGAGAGTGCATCAATGAAAGGGTCTACCTTTCTTCAGTTTAGGAGGGATGCTTCAATCCTCAATGAGACACCCTATTCACGGTTTTCCCTAGAATCTGAAGCAAGCCAAGGTTCTCAAATACAAGTTTCAAAGAGAAGTGAATCTTCAGCAAAAGCATCAAACCAATCGCTCTCTGTATATGGGGAGATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGAGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTTGAGATTACAAGGGACCAGACTTCAAATTCTCTATCTGACCATAGGAGTAATAACAGTCTCAGTGAAAACTCTGTGGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAGCATCCACCACTTCTGAGATGAGAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCACCATGAAACCAGAAAAAGCTGCAGGAAAAACTGGCAAGTTTGGTTCTGCTAATACTGCAAATGGAATAGTGGGTGAGAAGCTTGACAGGAAAACAGCAAAGGGTATCAGTCCAGCCATCAGACAGGCCAAGGATTCCCTTGGCCAACCCTTCCACTCGGTGGATAAGAGCAACAACAAGATGAGAACATCAAAATTGTTGCAATCCCCAAAAGTTGCTCAAGTAATCAATGGGGAAAACGCCACCAACTCCAACAATACAACAGGGGCCAAGAGCCCAAGGCTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACAACTATCCCATCATCAGAATCATGCAGTAACAGAAGACAACATAATAGGCAATCAGTGGAATTATCTTCCCCAAGTACTACACCCAGACAAAGATTCAATGAGACCAAAAACCAAAGGGAGGATTTTAAGCAAGAAGTTGGCGTAAAAGTCATTCAAACTGATCAAAGTAATGCAGCAAAAGATTTGAGCAAGGAAAGCTTTCAAGTTGAGAAAATAGTTACAGCAGAGCAACCAAGCCCCGTGTCTGTTCTTGATGCTGCTTTCTACAATGAAGAACCACCTTCACCGGTCAAAAAGAAATCAGACATCACAAGAGATTTAGATGATACTCTTTATGATAGCAGTGAGGAGAAGTCAGAACATCTCCCGCTTTTATCCAACAATGCAAAAGCCAACTTCAGCAGTAGAACTCAAAATTTGGTTCAAATTCTCCACCAAATTGATTCCAATGATGAGAGATTTACCAATTTCAGAGACTACAATGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGCTTCTCAGCAGTCCAAGCTCTAGCTACGATTTTCATTCATCAAGTCACCCTATAAACCCAAAGTTGTTCCTTGCTCTAGAGCAAATCAAGACAAACAAGAATTGTTTCAACATTGAATACGATGCCAAGAAAATGGCTGGGCTGAGTAGTCCTCAGAAAATGCAAAGAAAGCTAATATTTGATGTTGTTAGTGACATTCTAGCTCAGAAACTGATATTGGAAAGTTCTACTCCGTGGTGCCAGTCGAATCAGCCAGTAAGTAGAAAAATAAGTGGGGAGCTGCTGTTGGATGAGCTTTGCATAGAAATTGATAAGTTGCAACATAAAAATAGGAATGACAAACTGATTAACGAGGATGAGAACATGACAAGCCTCCTGTGGGAAGAGTTGATGCACTATCCCTCAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATGTTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTACCTAACCATTCTGGTAAGCACTGCAGACAACAGCTATTTTCCAAGTAG 2784 0.4109 MSKKVFTMKDENPELQKQIGCISGFFQLFDRHRFLTAQQGSSHNQNIQTKGGTRNQMKEVNNTTQMAMGKNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFSRAIQIEPPSIISPMKIPENSNPEIEVKQHGNKGPHSLDFYDIVKDSMHRDVQGLSVKIVAKGEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQDSLKSARKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYGSSGTMFKQLQEPETSRRSSSVVARLMGLKTFPESTEACDTQPRIYSSKNESDAESCTNESASMKGSTFLQFRRDASILNETPYSRFSLESEASQGSQIQVSKRSESSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFEITRDQTSNSLSDHRSNNSLSENSVVKSPRIRQKDPASTTSEMRNSTQGSKSPIFTMKPEKAAGKTGKFGSANTANGIVGEKLDRKTAKGISPAIRQAKDSLGQPFHSVDKSNNKMRTSKLLQSPKVAQVINGENATNSNNTTGAKSPRLQKKFGLERRSPTTIPSSESCSNRRQHNRQSVELSSPSTTPRQRFNETKNQREDFKQEVGVKVIQTDQSNAAKDLSKESFQVEKIVTAEQPSPVSVLDAAFYNEEPPSPVKKKSDITRDLDDTLYDSSEEKSEHLPLLSNNAKANFSSRTQNLVQILHQIDSNDERFTNFRDYNDPDHKYISEILLASGLLSSPSSSYDFHSSSHPINPKLFLALEQIKTNKNCFNIEYDAKKMAGLSSPQKMQRKLIFDVVSDILAQKLILESSTPWCQSNQPVSRKISGELLLDELCIEIDKLQHKNRNDKLINEDENMTSLLWEELMHYPSIYTNSYMEIPNVVLDVERLIFKDLITEVVRSELPNHSGKHCRQQLFSK 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium199g00001 927 MobiDBLite consensus disorder prediction 201 218 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 409 462 - -
Vium199g00001 927 PANTHER LONGIFOLIA PROTEIN 7 925 IPR033334 GO:0051513
Vium199g00001 927 MobiDBLite consensus disorder prediction 409 460 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 501 524 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 561 611 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 76 103 - -
Vium199g00001 927 Pfam Domain of unknown function (DUF4378) 732 906 IPR025486 -
Vium199g00001 927 MobiDBLite consensus disorder prediction 291 311 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 340 366 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 197 218 - -
Vium199g00001 927 MobiDBLite consensus disorder prediction 566 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium199g00001 Vium-Chr199 10573 15756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium199g00001 2 912 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.751 1.71e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium199g00001 - - vra:106774015 1641.71