Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1987g00006 ATGGCAGATTCCAATGTGGTTCTACTGGATTTCTGGCCAAGCTCTTACGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGTATCTCGTATGAGTGCAAGCAAGAAGATTTAGAAGCTAAAAGCTCTCTGCTTCTAGAGATGAACCCAGTTCACAAAATGATACCAGTTTTGATTCATAATGCAAAACCCATCTGTGAGTCACTCAATATTGTTCAGTACATTGACGAGGCATGGAAACACAAATCCTCTCTGCTTCCCTCTGACCCTTACAAGCGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATGCTGTGAAGAGGGTATGGTCGGGGAAGGGTAAAGAGCAAGAAGAGTGGAAGAAAGAACTGATAGAATGTTTGAAGAGGCTGGAAGATGAACTTGGAGACAAGGCATATTTTGGTGGTGAAGAGTTTGGGTATGTGGATGTGGCTCTTGTTCCTTTCACTAGCTGGTTTTACACGGTTGAGACGTTTGGGAAACTAAGCATTGAAGATGAGTGTCCAACACTTGTGGCTTGGGCCAAAAGGTGCATGCAGAAAGAGAGTGTGGCCTCATCACTCCCTCACCCTGAACAGATCTATGCTTTTTCCCTGCAATATAAACACAGACATGGACTTCAGTAG 663 0.4404 MADSNVVLLDFWPSSYGMRVKIALAEKGISYECKQEDLEAKSSLLLEMNPVHKMIPVLIHNAKPICESLNIVQYIDEAWKHKSSLLPSDPYKRSQARFWGDYIDKNVYNAVKRVWSGKGKEQEEWKKELIECLKRLEDELGDKAYFGGEEFGYVDVALVPFTSWFYTVETFGKLSIEDECPTLVAWAKRCMQKESVASSLPHPEQIYAFSLQYKHRHGLQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1987g00006 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vium1987g00006 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vium1987g00006 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vium1987g00006 220 Gene3D Glutaredoxin 1 88 - -
Vium1987g00006 220 Gene3D - 89 220 - -
Vium1987g00006 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vium1987g00006 220 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Vium1987g00006 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Vium1987g00006 220 FunFam Glutathione S-transferase U20 89 220 - -
Vium1987g00006 220 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vium1987g00006 220 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Vium1987g00006 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vium1987g00006 220 CDD GST_N_Tau 6 79 - -
Vium1987g00006 220 Pfam Glutathione S-transferase, C-terminal domain 118 193 IPR004046 -
Vium1987g00006 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1987g00006 Vium-Chr1987 21224 22415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1987g00006 1 220 Glutathione S-transferase Gene Family AT1G17180 59.091 2.07e-97 281