Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium195g00001 ATTTTTCAGGCTCGACCCTTGCTAAATGATGCACTTGAGAGTGAGGAATTTGAGATTTTGACAGATCCAAAGCTAGGAAAAAAGTACGTTGAAAGTGAAATGGTTTGCATGATTGAAGTTGCTGCTGCTTGCGTGAGACATTCATCTGCCAGAAGACCTCGGATGGGACAGGTTGTTAGAGCTTTTGATGGTTTAGCTATGTGTGATCTTTCAAATGGAATGAGAGTTGGGGATTCTTCGCAGCAATCCGCAGAAATAAGATTATTACGTAGAATGGCATTTGGTTACAGTTCAGAATTTTTTAGCCACTCAAGTTTGAATGAGTAA 327 0.4006 IFQARPLLNDALESEEFEILTDPKLGKKYVESEMVCMIEVAAACVRHSSARRPRMGQVVRAFDGLAMCDLSNGMRVGDSSQQSAEIRLLRRMAFGYSSEFFSHSSLNE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium195g00001 108 Gene3D Transferase(Phosphotransferase) domain 1 2 75 - -
Vium195g00001 108 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 92 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium195g00001 Vium-Chr195 4787 5402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium195g00001 4 107 Trihelix Transcription Factor Family AT5G38560 57.265 8.96e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium195g00001 - - vum:124827956 214.157