Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1943g00034 ATGGGAAGAGAAAGAGAGGCAACGAAGGTAGCATACACAGTGGAGCAGCTTGTGGCCTTCAATCGATACAATCCTGATATTCTTCCAGATCTCGAAAACTATGTCAACGATCAGGTTTCATCTCAAACATATAGCTTGGACGCCAATCTCTGCCTTCTTCGCCTTTACCAGTTTGAACCGGAAAAAATGAGTTCCCAGATTGTGGCCCGCATATTGGTTAAGGCGCTTATGGCAATGCCGGCCCCAGATTTCAGCCTATGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACTTTGATTGTTCTGTCTCATTATTTGGAGACAGGAAGATTTCGTCAGTTCTGGGATGAAGCAGCTAAAAGTCGCCATATAGTTGAAGCTGTGCCAGGGTTTGAGCAGGCAATTCAAGGATATGCAGTCCATGTCCTTTCCCTGACTTACCAAAAGATTCCTAGAACTGTTCTTGCTGAGGCTATTAACATCGAAGGTTTATCCTTGGACAAATTTCTTGAGCACCAAGTAGCCAACAGTGGTTGGGTTATTGAGAAAAGCCAAGGCAGGGGTCAAGTCATTGTCCTTCCGAGAAATGAATTTAATGACCCAGCTTTGAAGAAAAATGCTGCAGACAGTGTACCATTGGAGCACATTACCCGCATCTTCCCCATTCTTAGTTGA 690 0.4435 MGREREATKVAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAVHVLSLTYQKIPRTVLAEAINIEGLSLDKFLEHQVANSGWVIEKSQGRGQVIVLPRNEFNDPALKKNAADSVPLEHITRIFPILS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1943g00034 229 ProSiteProfiles PCI domain profile. 44 203 IPR000717 -
Vium1943g00034 229 FunFam Eukaryotic translation initiation factor 3 subunit K 6 122 - -
Vium1943g00034 229 SUPERFAMILY ARM repeat 11 131 IPR016024 -
Vium1943g00034 229 SUPERFAMILY "Winged helix" DNA-binding domain 134 226 IPR036390 -
Vium1943g00034 229 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 5 229 IPR009374 GO:0003743|GO:0005737|GO:0005852
Vium1943g00034 229 Gene3D - 125 228 IPR036388 -
Vium1943g00034 229 Gene3D ARM repeat; domain 1 7 122 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Vium1943g00034 229 Pfam CSN8/PSMD8/EIF3K family 64 190 IPR033464 -
Vium1943g00034 229 FunFam Eukaryotic translation initiation factor 3 subunit K 125 228 - -
Vium1943g00034 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 6 226 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1943g00034 1 229 Eukaryotic Initiation Factors Gene Family AT4G33250 74.892 1.68e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1943g00034 K15028 - gmx:100306445 441.425