Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1927g00009 ATGGCCAANCTTAATGGCGAAGTATACATGTTAAGGACCAAATTTGTTCGTTCATTATTTGCAGCTACTCCTATGAATCCTGCACTGAATGTAGATGCTGAATTTTCTTACGGTGCGGGGCAACTCAATCCTTTGAAAGCAGTAAATCCTGGACTAGTTTATGATGTTGATGAATATGATTATATTAGTTTTCTGTGTGGACAAGGTTACAATTCATCAGCGCTGCGAATAATTACCGGAGCTGATATAATTTGCACATCAGCAAATACAGAGTCTGTTTTCAACCTTAATCTCCCATCTTTTGCTCTATCAACCCCTCGCTCAAGCCACAACAATGTCACTTTTGTTAGAACTGTTACAAATGTTGGATCAGTTACATCCAAATATAGGGCCACGATAACTGCACATCCATCTTCTTTGAAGGTCGAAGTAGTGCCAAATGTTTTGGCCTTCTCATCGTTGGGTCAGAAGCTGTCTTTTACCCTTAAGATTGAAGGAAGCATTAATGCAGACTTGGTTTCTTTTTCTTTGATTTGGGATGATGGCACTCTTAAGGCAAGGAGCCCCGTTGTTGTTTATGTTCCATAA 588 0.3963 MAXLNGEVYMLRTKFVRSLFAATPMNPALNVDAEFSYGAGQLNPLKAVNPGLVYDVDEYDYISFLCGQGYNSSALRIITGADIICTSANTESVFNLNLPSFALSTPRSSHNNVTFVRTVTNVGSVTSKYRATITAHPSSLKVEVVPNVLAFSSLGQKLSFTLKIEGSINADLVSFSLIWDDGTLKARSPVVVYVP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1927g00009 195 Gene3D - 65 194 - -
Vium1927g00009 195 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 192 IPR045051 -
Vium1927g00009 195 Pfam Fibronectin type-III domain 95 192 IPR041469 -
Vium1927g00009 195 Gene3D Peptidase S8/S53 domain 22 61 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1927g00009 Vium-Chr1927 143707 144294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1927g00009 34 194 Subtilisin-like Serine Gene Family AT5G58830 46.667 4.27e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1927g00009 - - vum:124828448 376.711