Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1917g00002 ATGGCGGATTCTTCAAGCAACTCCAAGGATAAGAACAACACGCGCCTCTACCATCCCTACAAGGACCTCAACGTTCCAATCCAAAAACTCTATAACCTCCCCACCGCGCCGGAGCACCTCTTCTCGGAAGAAGCCGCCAGGACCCACCGATCCTGGGGCGACAACCTCCAGTATTACACCGGCACCGCCTACCTCTCCGGTGCAATCATCGGCGCCACCAGAGGCACCGTCCAGGGCCTCCGAGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGTCTCAACCGAGTGCTCAACTCAGGCGGCCACGCGGGTCGCAAACTCGGCAACTCGCTCGGCGTCCTGGGTCTCATCTTCGCCGGCCTCGAGAGTGGGATGATCCACGCCAGGGGCACCGATGACTTAGTCAACAGCGCCGTCGCCGGACTCGGCACCGGAGCGCTCTACAGGGCTGCGGCCGGACCTCGATCAGCCGCCATAGCCGGTGCCATCGGAGGGATCGCCGCGGCGGCGGCGGTTGGAGGAAAGCAGGCTTTGAAGAGATACATACCGATCTAG 555 0.6252 MADSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1917g00002 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Vium1917g00002 184 PANTHER TIM23 26 171 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1917g00002 Vium-Chr1917 19842 20695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1917g00002 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 55.914 2.04e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1917g00002 K17794 - gmx:100779163 289.271