Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1912g00009 | ATGGCTTCTATAGAATGGCTACAAGAACAACTTACCATAGCTTTTCTTTCTTCTACTTGTTATCCATATTTTCTCTTCTTTCTTCTTGCTGTTGCTGTGTTGAAGCTAGCAAGAAGATCAAAAAACAAAGCCAGTTTCAATCTGCCTCCATCACCAAGAAAGTTACCAATCATTGGCAATCTTCATCAGATAGGCACATTGCCATACCGTTCTTTCAGTTCCCTCTCACAAAAGTATGGTTCTCTTATGTGGTTGCAGTTGGGGCAGACTCAGACTTTGGTGATTTCATCAGCAGATTTGGTGAGGGAAATCATGCAAAATCATGACTTAACCTTCTCAAACCGACCCAAAATCACAGCAGCCAGGTACATACTGTACGGAGGTAATGACATTGGTTTTTCATCCTATGGAGAAAGCTGGAAACTGAAAAGAAAAATATGTTCCCTTGAACTTCTCAGTGCCAAAAGGGTGCAGTCATTTCGCCTCATCAGGGAACAAGAGGTTGCAGAATTGGTCAAAAAGATAGGCAAAGCAACCTTGACAGAAGAATTTTCTGTGAATCTAAGTGAGTTGCTTCTTGAAGTATCAGACAACATCATCTGTAAATGTGCTCTTGGACAGAAGTACAATAGCAGCAGGGTCAAAGAGCTTGCAAGGAGGTTGATGATTCAACTTGGAGCTGACACTGTGGGGGATTACTTTCCCTTGCTCAGTTGGGTTGATTTTCTGAATGGAAAAATTCAAAAATTCAAAGCCATTTTTGAAGCATTTGATATCTTTTTAGATGAGCTAATTGAGGAGCATAAGAAGGTTCAGAGGGAAGCTGATCACCGCTCCACTGAGAACGGCTTTGTGGATATCCTCATCCAATATCAGAAGAATGCCATGCCTGATTCTGAGCTCACCAATGATGACATCAAATCAATTATAATGGATATGTTTTCAGCAGGAAGTGACACAACTGCCTCAACACTAGAGTGGACTATGGCAGAGCTGATGAGAAATCCAACGAAGCTGAAGAAAGTTCAGGAAGAGGTGAGAAAAATTGTAGGGAATAAGTCAAAAGTAGAAGAAAATGACATAAACCAAATGGACTACATGAAATGTGTAGTGAAAGAAACTCTAAGGTTACATCCAGCTGCTCCACTCTTGGCTCCAAGAGAGACAGCATCTGCATTGAAACTCAGAGGATATGATATTCCTCCCAAAACACTGGTATATGTGAATGCATGGGGGATTCAGAGGGACCCTGAAATCTGGGAAAGGCCTGAAGAGTTCATTCCAGAGAGACATGCTAATAACCATGTTCCTTTGAAAGGCCAATACATTCCATTTGGTTTTGGGAGAAGGGCATGCCCTGGAATGACCTTTGGACTTGTTAATGTTGAGTATACACTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTACCTACATCTCATTCTTCTGCACAAGACATAGACATGACTGAGACATATGGGCTTATTACCTCCATAAAAGTGCCACTTCATGTCAAACCACTTCCCTTTCAACCAAGTTTCTAA | 1545 | 0.4104 | MASIEWLQEQLTIAFLSSTCYPYFLFFLLAVAVLKLARRSKNKASFNLPPSPRKLPIIGNLHQIGTLPYRSFSSLSQKYGSLMWLQLGQTQTLVISSADLVREIMQNHDLTFSNRPKITAARYILYGGNDIGFSSYGESWKLKRKICSLELLSAKRVQSFRLIREQEVAELVKKIGKATLTEEFSVNLSELLLEVSDNIICKCALGQKYNSSRVKELARRLMIQLGADTVGDYFPLLSWVDFLNGKIQKFKAIFEAFDIFLDELIEEHKKVQREADHRSTENGFVDILIQYQKNAMPDSELTNDDIKSIIMDMFSAGSDTTASTLEWTMAELMRNPTKLKKVQEEVRKIVGNKSKVEENDINQMDYMKCVVKETLRLHPAAPLLAPRETASALKLRGYDIPPKTLVYVNAWGIQRDPEIWERPEEFIPERHANNHVPLKGQYIPFGFGRRACPGMTFGLVNVEYTLANLLYWFNWKLPTSHSSAQDIDMTETYGLITSIKVPLHVKPLPFQPSF | 514 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1912g00009 | 514 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | Gene3D | Cytochrome P450 | 33 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 100 | 121 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 195 | 213 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 76 | 95 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | Coils | Coil | 339 | 359 | - | - | |
Vium1912g00009 | 514 | SUPERFAMILY | Cytochrome P450 | 49 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | CDD | CYP71-like | 78 | 503 | - | - | |
Vium1912g00009 | 514 | FunFam | Cytochrome P450 83B1 | 35 | 506 | - | - | |
Vium1912g00009 | 514 | Pfam | Cytochrome P450 | 49 | 481 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium1912g00009 | 514 | Coils | Coil | 261 | 281 | - | - | |
Vium1912g00009 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506|GO:0016705 | |
Vium1912g00009 | 514 | PANTHER | CYTOCHROME P450 71B11-RELATED | 30 | 507 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1912g00009 | Vium-Chr1912 | 64688 | 66740 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1912g00009 | 24 | 508 | Cytochrome P450 | AT5G25120 | 40.000 | 5.50e-128 | 380 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1912g00009 | K20617 | - | gmx:100785621 | 704.516 |