Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1902g00020 ATGGGTTCTCTCCCACACGTAGTAGAGGACTGTTTGGGGTTTCTGCAACTCTTTAGCGACGGTTCTATTTTCCGTTCAAACGATATAGAGTTCAAAATATCAGCAGTTCAAGATCATTCCGTAACCTTCAAGGACTATCTCTTCCACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAACCCCAACACGTGACGCTCAACACCAAGAAGCTTCCTATTGTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACCTGGCCCCATATTCACAACTGTTGCACGCGCCTCGCCGCTGGGCTCCAGGCGGTCGTCCTCTCGCCGGACTACCGCCTCGCGCCGGAACACCGCCTTCCGACGGCTGTGGACGACGCGGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGACTGAGACTGAAGGAAGATGAAAACGGTGGGGACGCCTGGCTGAGTGCTGACGTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCCTCTGGCGGGAACATTGCCCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGTGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGAACCAAGTCCGAGGAAGGTCCACCAGAGCTCATGCTTAACCTCGAGTTATTGGACAGATTTTGGAGGTTGTCGATGCCTTTGGGAGAATCGAGAGACCACCCATTGGCGAATCCGTTTGGAGCTGGAAGCCCTAATCTTGAAAAAGTGAAGCTTGATCCTATTTTGGTGATAGTTGGTGGCAATGAATTGCTTAAGGATAGAGCAGAAGACTATGCTCGAAGGTTAAAAGAACAAGGCAAAGACATTGAATACCTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACTCATGATTCATACTCACAGCTTGGAGAAGAGGTCATCCAAATCCTTAAACAATTCATGCTTCGGACTTCTGCTTGA 984 0.5183 MGSLPHVVEDCLGFLQLFSDGSIFRSNDIEFKISAVQDHSVTFKDYLFHKRFNLSLRFYKPQHVTLNTKKLPIVIFLHGGGFCFGSRTWPHIHNCCTRLAAGLQAVVLSPDYRLAPEHRLPTAVDDAVEAVRWLQRQGLRLKEDENGGDAWLSADVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPPELMLNLELLDRFWRLSMPLGESRDHPLANPFGAGSPNLEKVKLDPILVIVGGNELLKDRAEDYARRLKEQGKDIEYLEFEGCEHGFFTHDSYSQLGEEVIQILKQFMLRTSA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1902g00020 327 Coils Coil 268 288 - -
Vium1902g00020 327 Pfam alpha/beta hydrolase fold 74 302 IPR013094 GO:0016787
Vium1902g00020 327 SUPERFAMILY alpha/beta-Hydrolases 5 322 IPR029058 -
Vium1902g00020 327 Gene3D alpha/beta hydrolase 18 326 IPR029058 -
Vium1902g00020 327 PANTHER ARYLACETAMIDE DEACETYLASE 13 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1902g00020 Vium-Chr1902 139772 142457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1902g00020 7 308 Carbohydrate Esterase AT5G16080 34.416 2.64e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1902g00020 - - vun:114190999 620.157