Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1888g00003 ATGGTTAAAAGTGCCAAGGAAAGCATAGATCTTAAAGCTAGCAATTCTGAAATTTATGGAAAGATGCAAGCAGTATTTATAGAAATGGATAAGTGTTCAGATAAACATTTAGTGGACAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTAAACGGGGAAGATAAAGGACATGACAAAAAGAGTAAGTTTGATCCTGAAAAACACATTGAAGCATATTTGCCCGTAAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTTGGAGCATCAGTCTTTGGCATGCCTGTCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCGTACATGGCCATTGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATCTTACTCCTTTTTGTAACACCCAGTAGGTGGCACAAGTTGTTGGAGGGGGATCATGCTTCCTATGTCGAGTCAGTACCTTACAGATACATAGTATTGTTCACAGTCTTCCAATGTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTACTGATAACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCAACATCTTAGGGAACTGGATGCAGCTGAATACGAAGAAATAATTGCTGCTCCAGGACAAACTTTCAATAGGTCTTTCAGGGAGGTAGAATCACCCAGAGTTGGATCAGTGGAAATAGTTGATGCTGAAATATTAGATGAGTTAACCACAAATAGAGGGGAGTGGAAGATTAGACATGTCAGCTCCATTGAGGAAAGAAATCGCCAGATGTCCCCTGATGAAACCGGATCTCCAGACCCAACTTGTTAG 873 0.4044 MVKSAKESIDLKASNSEIYGKMQAVFIEMDKCSDKHLVDKELEDLKEVVLNGEDKGHDKKSKFDPEKHIEAYLPVRVKEQRVSNLLQSIFVGASVFGMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLEGDHASYVESVPYRYIVLFTVFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPQHLRELDAAEYEEIIAAPGQTFNRSFREVESPRVGSVEIVDAEILDELTTNRGEWKIRHVSSIEERNRQMSPDETGSPDPTC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1888g00003 290 PANTHER ANION EXCHANGE PROTEIN 42 223 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vium1888g00003 290 Pfam HCO3- transporter family 75 165 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1888g00003 Vium-Chr1888 83793 85065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1888g00003 1 284 Antiporters AT4G32510 58.503 3.35e-115 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1888g00003 K24194 - vum:124828290 570.466