Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1846g00001 ATGGAGCTAGATAACCGGAAAAGTGACCAGGGCAGCAATGCACCATTTTCATCCAATCTTCAGCTCTATTCTTACTGCCATAGCTCTTGCTCATGGCGTATCCGCTTTGCTTTATGCCTCAAAGGAATTCCGTATGAGTACAGAGAAGTGGACCTGGTAAAAGGAGAGCAATACAGTCCAGAATTTGAGAGATTGAATCCTCTGCACTATGTTCCAGTATTAGTTGATGATAATGTAGTGGTTTCAGACTCTTATGCAATATTTCTGCATTTGGAGGAAAAATATACTCAGAAGCCACTGTTGCCAGTTGATCCACAGCTCAGAGCTCTAAATCTTCAGGTAGCAAGTATTGTTCATTCCAGTATACAGCCTCTTCACATGCTTGCTGTTCTGAAAGATATGGAGAAAATGTTTGGTGCAGAATCAAAACCGTGGGCCCAGTTTACCATTAACAAAGGTTTCTCAGCTCTTGAAAAGCTACTGAAGGATTTTTCTGCAACATATGCCACAGGGGAACGTATCTATATGGCTGATGTATTTTTGGCACCACAGATAGAACAGGCAGTTCAGAGGTTTGGTGTCGATATGTCCAAATTCCCTACACTGAGTAGGTTGTATGAAACATACAAAGCTTTGCCAGAGTTTCAAGCCTCATCACCCCAATGA 666 0.4204 MELDNRKSDQGSNAPFSSNLQLYSYCHSSCSWRIRFALCLKGIPYEYREVDLVKGEQYSPEFERLNPLHYVPVLVDDNVVVSDSYAIFLHLEEKYTQKPLLPVDPQLRALNLQVASIVHSSIQPLHMLAVLKDMEKMFGAESKPWAQFTINKGFSALEKLLKDFSATYATGERIYMADVFLAPQIEQAVQRFGVDMSKFPTLSRLYETYKALPEFQASSPQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1846g00001 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Vium1846g00001 221 Pfam Glutathione S-transferase, N-terminal domain 22 99 IPR004045 -
Vium1846g00001 221 PANTHER MALEYLACETOACETATE ISOMERASE 20 220 - -
Vium1846g00001 221 SUPERFAMILY GST C-terminal domain-like 99 220 IPR036282 -
Vium1846g00001 221 NCBIfam maleylacetoacetate isomerase 21 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vium1846g00001 221 SFLD Main (cytGST) 20 210 - -
Vium1846g00001 221 Gene3D - 101 221 - -
Vium1846g00001 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 221 IPR010987 -
Vium1846g00001 221 SUPERFAMILY Thioredoxin-like 19 102 IPR036249 -
Vium1846g00001 221 Gene3D Glutaredoxin 22 97 - -
Vium1846g00001 221 Pfam Glutathione S-transferase, C-terminal domain 140 216 IPR004046 -
Vium1846g00001 221 SFLD Glutathione Transferase (cytosolic) 20 210 IPR040079 -
Vium1846g00001 221 CDD GST_C_Zeta 105 221 IPR034330 -
Vium1846g00001 221 FunFam Maleylacetoacetate isomerase 103 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1846g00001 Vium-Chr1846 2228 5912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1846g00001 16 221 Glutathione S-transferase Gene Family AT2G02380 49.275 3.50e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1846g00001 K01800 - gmx:100796296 380.948