Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium183g00001 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTATCTCTTCCTCATTGAATCTGACCACACCCTATCACAGAATCATTCTCACACTCTCAAAGCTAGAGATCTTGACATCTCTGTCAGAAGAGAACTTCTTTCCTTAATCGCAAAGTTGTCCTGCACTTTGGATCCGGCTTTGTCTTATCTTGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGAATTTCGCAACCAAAGTCATGGGTCCTCAGGCTCATTGCTGTCTCTTGTATTTCTCTAGCTGTCAAGATGATGAGAACTGAATGCCCAGATGCTCAGGATATTTTGAATCAAAGTGATGGGGGCATCATCTTTGAGACACAAACAGTGCGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACTCCATTCTCTTTCATACCTTTCTTCATTGCCTTGATGGGTATCGAAGGCTCACCAATGGGGAGGGTTCTGAAAAACCGTGCTTCTGAAATCATATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATGACTGCTGCATCTGCTCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCGTCCTTCTTAAAAGCAATAACCGAGTCTTCATATGTAAATAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACACCGATTAATGTGTTGGACCATCATTTTCTCAGCTCAGAAAGTGAAAAAACCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGAAGGAAAATCACTCTATGTGGAAACAATCCAACGATCCACAACTCTTGA 933 0.4319 MEFDLENPLENLHSDAVSYLFLIESDHTLSQNHSHTLKARDLDISVRRELLSLIAKLSCTLDPALSYLATNYLDRFLASQGISQPKSWVLRLIAVSCISLAVKMMRTECPDAQDILNQSDGGIIFETQTVRRMEALILGALQWRMRSITPFSFIPFFIALMGIEGSPMGRVLKNRASEIIFMSQREIRLWEFKPSMTAASALLCASHELFPFQYPSFLKAITESSYVNKESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKTNGITVADSPLRQERDLKRRKITLCGNNPTIHNS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium183g00001 310 Gene3D - 23 237 - -
Vium183g00001 310 SMART cyclin_7 48 139 IPR013763 -
Vium183g00001 310 Gene3D - 30 146 - -
Vium183g00001 310 SUPERFAMILY Cyclin-like 13 145 IPR036915 -
Vium183g00001 310 CDD CYCLIN_AtCycD-like_rpt2 148 239 - -
Vium183g00001 310 SMART Cyclin_C_2 148 261 IPR004367 -
Vium183g00001 310 FunFam D6-type cyclin 143 237 - -
Vium183g00001 310 SUPERFAMILY Cyclin-like 129 244 IPR036915 -
Vium183g00001 310 PANTHER CYCLINS 45 250 IPR039361 -
Vium183g00001 310 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Vium183g00001 310 FunFam D6-type cyclin 30 142 - -
Vium183g00001 310 Pfam Cyclin, C-terminal domain 148 247 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium183g00001 Vium-Chr183 20096 22295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium183g00001 1 295 Core Cell Cycle Gene Families AT4G03270 42.308 9.17e-69 214