Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1832g00001 ATGACCGGAGGCGGATCGACGGGAAGGATGCCCACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGATAGAAGACGGAGAGCGATTGCTGCCAAGATCTACGCCGGCCTTCGAGCTCAGGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCTCAGAAGCTGGTTGGATCGTGGAAGAAGACGGCACTACCTACAGAAAGGGATGCAGGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCTTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGTCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGGCCAGACCGCCGCCGGTCCCCCTTCCCCTACCTTCAACCTCATGAAACCCGCTATACACCAGATCCCTGCTCAGGAGGGCGTACAGTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTGTCCGATTTTGACTTCGAGCATGGAAGAGTGAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGAGCTTACTCTCGGATTTGGAAAAGCTTGA 924 0.5736 MTGGGSTGRMPTWKERENNKRRDRRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGCRRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFQGQTAAGPPSPTFNLMKPAIHQIPAQEGVQWGSVAEIGRGVSDFDFEHGRVKPWEGERIHEVGMDDLELTLGFGKA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1832g00001 307 MobiDBLite consensus disorder prediction 152 177 - -
Vium1832g00001 307 Pfam BES1/BZR1 plant transcription factor, N-terminal 7 131 IPR008540 -
Vium1832g00001 307 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 303 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vium1832g00001 307 MobiDBLite consensus disorder prediction 191 221 - -
Vium1832g00001 307 MobiDBLite consensus disorder prediction 191 205 - -
Vium1832g00001 307 MobiDBLite consensus disorder prediction 86 127 - -
Vium1832g00001 307 MobiDBLite consensus disorder prediction 152 170 - -
Vium1832g00001 307 MobiDBLite consensus disorder prediction 1 25 - -
Vium1832g00001 307 MobiDBLite consensus disorder prediction 73 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1832g00001 Vium-Chr1832 1261 2867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1832g00001 9 307 BZR Transcription Factor Family AT1G75080 57.944 2.82e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vium1832g00001 BES1_N 3.4e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1832g00001 K14503 - gmx:100795837 491.886