Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1829g00009 ATGACAATACCGTTCACCCAATGTTCAGAAAAGCTAGGGTACCTCATTCTTCAGTTAGCAAAAAATTTCATCGTGTATATGGCCATGGTGGTTGCATGCAACGGTTTACATTTCCTTCTAAAGCCCTATTCACAACCTCGCATTACTTCTGACATAGTTGTAGGAATTGTATTGGGGAACATACCTTTTTTACGAAAACTGTTCGATGAATTCAACAGAGCGTTTGGATTTATCATGGATTTTGGGATGATGTGTTACATGTTTGCTTTGGGTATAGAGATGGATCCCAACGTACTGTTCAAACGCCCGAACAAGGATGCTCTGGTTGCATACACGGCGATACTCTGCACCTTCGTGATATCCATTGCAATGGTCCCATTTCTCCATTTCTTCTCACGGCATACAGGCGTAGCATTCACCATCTCCGTCTCTGCTCTTCTAGCGAGTTCAGCATCTCCGGTTCTCACGCGATTACTAACAAATATGAAGATAGGAAAATCAGACATTGGAAAGCTTGTGATAGCAGCAGGAATGCACTCGGATTTAGTCTGCTTGTTGATTTTCTCAATTTGCTACATTTTCATGCCAACCGATGCATACTGCATTGGGCATCACAGTGAAAGGACGCTGAAGAACGCCATAAAAACAATAATTGCGGTGGTGGTGCAGACGACGTTCACGGCGATGGTTTCGCCGATTTTCATGGCATGGGTGAACAATGAGAACCCTGAAGGCAGACCCATGAAAGGGTCGCATCTGGTATTGTCGGTTGCCTTCATGGTCTTGATTTGCTCCCCCTCGACTCTATACGACTTTAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTCTTCCCCGTGATGGAAGAGTTTCGAAATGGATTATCAGCAAAATCAACTACATGTTGTCCACCATCTTCTTTCCCATGTTCTTCTTGTGGATGGGCAATGCAGCTAATGTCACCCAATTCAGACCTGGAGACCCTACAACTTGGCTTAGGTTTTTTATACCTATTTTGATAGTCGTCACAGGTAAAATTGTTGGCACACTCATTTCTGGGGCAATACTTGGATTTAACTGGCGGGAATCTATTTTAATCGGATTGCTCCTCGTGACCAAGGGCCATTTTCAAATCTACATGGCAATCAAAGTGCTGACTTGTCGCATCAAAGATGGTGCCGACTCGTCGGGCCTTCTGTCGGTGGCATCGATATTTTTCTCAGTGGTGCATGCCCCTGCAGTTGTGACACAGATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTGTTAAAGCCATCAAGCGAGTTGAGAATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTTCTTCCATCAACTTCATGGAGATCTCAAGAGGGATATCAGACCCTGGCATGGTAATATATGTCGCAGAAATTATTGAATTAACTGAACATATATCATCAGTTATGCAGAATGGTGAAGGAGTACAAAGTAATACTATAAAAGACAAGGCCGTGGTAGAGATGAGAGAACAAATAACGAACTTGTTTCAAGCGTACATCGATAATGATGGAGATGGTATTACTCTCAAGAGAGCGTTGGCACTGTCAACAATCAATAACATGGCACAGAACATCTGCGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTTCCATTCCACAGGAACCAGCGTCAGGACGGAAAATTGGATGGTGGAAATCCAGGCTTCAGACATGTGAACCGAAAGTTATTAAAGAACTCTCCTTGTTCGGTGGGAATTCTAGTGAACAGAGGTTTTGGGTCAATTGGGAAAATATCAAGGTCTCAGCAATCAGTTAAAGTAGCAGCAATATTCATTGGCGGAAGAGATGATAGAGAGGCACTTTGTTATGTGGGTCGTGTGGCATGGCATCAAGGAGTACACGTGACAGTGATAAGATTCCTGGTAGATACCAGTGCAGAATCTACAAGACTGGCGGCTTATAGGGTCAGCCTCCCAGAGGAGGAGGAGATGGGATTGGATGATGAATGCTTTGCACAGTTCTATGAACAGCATATAGTTGGAGGTCGCATTGCTTATTTGGAGAAGCATCTGTCAAATGCATCAGAGACCTTCTCTACTCTTAAATCATTTGAAGGAGAATACTCACTTGTCATTGTAGGAAGAAAAGCTGGAGCAAACTCCGTATTGACAAAGGGTATGAATGACTGGCAACAGTGTCCAGAACTCGGACCAATAGGGGACGTTCTTTCAGGACCAGACTTTTCAAAGTCAGTTTCTGTATTGATAATTCAACAACACAAACTTAGAGGAGAACTAGATGGCCTTGACGAGGACTTCACTATCATGTAG 2364 0.437 MTIPFTQCSEKLGYLILQLAKNFIVYMAMVVACNGLHFLLKPYSQPRITSDIVVGIVLGNIPFLRKLFDEFNRAFGFIMDFGMMCYMFALGIEMDPNVLFKRPNKDALVAYTAILCTFVISIAMVPFLHFFSRHTGVAFTISVSALLASSASPVLTRLLTNMKIGKSDIGKLVIAAGMHSDLVCLLIFSICYIFMPTDAYCIGHHSERTLKNAIKTIIAVVVQTTFTAMVSPIFMAWVNNENPEGRPMKGSHLVLSVAFMVLICSPSTLYDFSPVLSAFMTGICLPRDGRVSKWIISKINYMLSTIFFPMFFLWMGNAANVTQFRPGDPTTWLRFFIPILIVVTGKIVGTLISGAILGFNWRESILIGLLLVTKGHFQIYMAIKVLTCRIKDGADSSGLLSVASIFFSVVHAPAVVTQIIKRARKRAPTHSNALQLLKPSSELRIFLCLHGLDNVPSSINFMEISRGISDPGMVIYVAEIIELTEHISSVMQNGEGVQSNTIKDKAVVEMREQITNLFQAYIDNDGDGITLKRALALSTINNMAQNICVLAEDLMIALIILPFHRNQRQDGKLDGGNPGFRHVNRKLLKNSPCSVGILVNRGFGSIGKISRSQQSVKVAAIFIGGRDDREALCYVGRVAWHQGVHVTVIRFLVDTSAESTRLAAYRVSLPEEEEMGLDDECFAQFYEQHIVGGRIAYLEKHLSNASETFSTLKSFEGEYSLVIVGRKAGANSVLTKGMNDWQQCPELGPIGDVLSGPDFSKSVSVLIIQQHKLRGELDGLDEDFTIM 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1829g00009 787 PANTHER CATION/H + ANTIPORTER 23 772 - -
Vium1829g00009 787 Gene3D - 20 429 IPR038770 -
Vium1829g00009 787 Pfam Sodium/hydrogen exchanger family 25 417 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium1829g00009 787 FunFam Cation/H(+) antiporter 28 20 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1829g00009 Vium-Chr1829 41080 44336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1829g00009 8 787 Antiporter Super Family AT3G52080 48.689 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1829g00009 K26731 - gmx:100815945 1224.92