Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1806g00003 ATGTTTGTCCTGGAGAATGGTGCGAAGAAGGGGGAAGACCCAAGGCTTCAGGCCATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAACGCGTTCAAAGACACGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCTGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTGCCAGGGGAAGTAATTTCTGAAAAATATGTTCTAGAATATGGCACTGATTGTTTGGAGTTGCATGTTGGGGCTGTTCAGTCCAGCGAACGTGTCATAATTATTGATGATTTGGTGGCCACAGGTGGAACTCTATCAGCAGCAATTAGACTTCTAGAACTTGCTGGTGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGAAGCAAGCTTAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGTCAACCAGAAAATGGTTATTGA 582 0.4416 MFVLENGAKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHNAFKDTVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGTDCLELHVGAVQSSERVIIIDDLVATGGTLSAAIRLLELAGAEVVECACVIGLSDLKVRSKLNGKPLYILLEPRQPENGY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1806g00003 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 186 - -
Vium1806g00003 193 CDD PRTases_typeI 53 185 IPR000836 -
Vium1806g00003 193 FunFam Adenine phosphoribosyltransferase 1 7 186 - -
Vium1806g00003 193 Pfam Phosphoribosyl transferase domain 59 164 IPR000836 -
Vium1806g00003 193 NCBIfam adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vium1806g00003 193 Hamap Adenine phosphoribosyltransferase [apt]. 19 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vium1806g00003 193 Gene3D - 6 186 IPR029057 -
Vium1806g00003 193 SUPERFAMILY PRTase-like 22 178 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1806g00003 Vium-Chr1806 16895 20157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1806g00003 12 185 PRT Gene Family AT1G27450 68.391 4.39e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1806g00003 K00759 - gmx:100818276 354.755