Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1806g00001 ATGTTTGTCCTGGAGAATGGTGCGAAGAAGGGGGAAGACCCAAGGCTTCAGGCCATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAACGCGTTCAAAGACACGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCTGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTGCCAGGTGGAACTCTATCAGCAGCAATTAGACTTCTAGAACTTGCTGGTGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGAAGCAAGCTTAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGTCAACCAGAAAATGGTTATTGA 465 0.4495 MFVLENGAKKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHNAFKDTVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGGTLSAAIRLLELAGAEVVECACVIGLSDLKVRSKLNGKPLYILLEPRQPENGY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1806g00001 154 Gene3D - 6 101 IPR029057 -
Vium1806g00001 154 CDD PRTases_typeI 53 146 IPR000836 -
Vium1806g00001 154 SUPERFAMILY PRTase-like 22 139 IPR029057 -
Vium1806g00001 154 Gene3D - 102 148 IPR029057 -
Vium1806g00001 154 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 101 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1806g00001 Vium-Chr1806 16862 20180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1806g00001 1 110 PRT Gene Family AT5G11160 75.455 6.45e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1806g00001 K00759 - gmx:100818276 265.003