Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1789g00022 ATGGAACCTTTTGCAGGAGTCATTAAGGATTTCAAAGGAAGGGCTGCTGTCTACAGACATGATTGGACCAGTGCATTATCTTCTGGGATTAAGATATTGGCTCCAACTTTCTACATATTCTTCGCTTCAGCTCTTCCGGTTATTGCTTTTGGGGAGCAACTTAACAGGGATACAGGTGGAAGCTTAAGTACAGTTGAAACACTAGCATCAACTGCTATTTGTGGAATTATCCACTCAATAGTTGGTGGTCAGCCTATGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTGTATCAGTTCTGCACAAAAAGTCCAGATCTTGGTGTTGAGATGTTTTTGCCTTGGGCTGGATGGGTTTGTGTGTGGACAGCTATGTTGCTGATTTTGCTTGCAACTTTCAATGCCTGCACAATTATCTCGAGGTTCACAAGACTTGCAGAGGAATTATTTGGCATGTTAATCACTGTCCTTTTCTTCCAAGAGGCTATAAGGGGAATCAAGGGTGAATTCGATACACCCGTATCAGAAAATCCTTCTGCAGAGGAACATAAATTCCAATGGCGGTATATAAACGGACTACTTGCAGTCATTTTCTCTTTTGGAATACTTCTCACTGCCATGCTCAGCAGAAGAGCAAGAACATGGAGATATGGAACAGGGTGGATGAGAGCTATTGTTGCAGATTATGGGATTCCATTGATGGTTATGCTTTGGACTGGACTATCCTATACTGTACCCGACAAAGTTCCATCTGCTGTTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAACCTGCTTCTCTCTATCACTGGACAGTAATAATGGATATGGGAAAGGTACCCGTGCTTTACATCTTTGCAGCATTTATTCCAGCTGTGATGGTAGCAGGTTTATACTTCTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATACAATCTTCAAAAGCCAAGTGCTTATCACTATGATATCTTCCTTCTTGGTATACTGACTCTGATTTGTGGTTTACTTGGTCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTAAGGAGGCAGATGGTCCGAAAAAAGGTGGTAAAAAGTGCCAAGGATTGCATTAAGCAACAAGGAACCAACAATGAATTATTTGGAAAGATGCAAGCTGTGCTTGTAGAAATGGATTCTAAACCAAGTGTTAACAGTTTGATAGACATTTTGGATTTGGTCCAGACTCAAGACTTGAAGAATTTGAAGGAGGCTGTAATGCAATCTTCTGATAATAATGGAGAAACTCGTACATTTGATCCTGAGAAACACATTGATGCCTACATACCTGAACGTGTTAATGAGCAAAGAATTAGTAACTTATTGCAGTCTCTCCTGGTTGGTCTATCAATTTTTGCCATTTCTGTCATCAAAATGATACCTACTTCAGTTCTGTGGGGATATTTTGCATACATGGCTATTGATAGTCTACCAGGGAATCAATTCTGGGAAAGAATATTGCTTCTCTTCATCTCACCAAGCCGGCGCACCAAAATTTTGGAAGGTCCTCATGCCTCGTTTGTGGAATCAGTGCCATTCAAGACCGTAGCCATGTTCACAGTCTTGCAGTGTGTGTACTTTTTAATATGTTATGGAGTGCAATTGATACCTATAGGAGGAATACTTTTCCCATTACCTTTCTTCCTTCTCATACCCATAAGAGAGCACTTGCTTCCCTACATATTCAAGCCTATTGATCTTCAAGAACTAGATGCTGCTGAGTATGAGGAAATTCTTGGAGTTCCAAATTCGATGAAAGATCCAAGTCTGGATGACAACAACGCCGAGATATTGGATCAGATGACAACTTACAGAGGAGAATTAAAGCATAGAACTGTAAGCCAAAGGAGAAACACAATCTTCAATGAAGAGAATCAACTGATAGATATTTATCTATAA 1977 0.4067 MEPFAGVIKDFKGRAAVYRHDWTSALSSGIKILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTVETLASTAICGIIHSIVGGQPMLILGVAEPTVIMYTILYQFCTKSPDLGVEMFLPWAGWVCVWTAMLLILLATFNACTIISRFTRLAEELFGMLITVLFFQEAIRGIKGEFDTPVSENPSAEEHKFQWRYINGLLAVIFSFGILLTAMLSRRARTWRYGTGWMRAIVADYGIPLMVMLWTGLSYTVPDKVPSAVPRRLVCPLPWEPASLYHWTVIMDMGKVPVLYIFAAFIPAVMVAGLYFFDHSVASKMAQQKEYNLQKPSAYHYDIFLLGILTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQMVRKKVVKSAKDCIKQQGTNNELFGKMQAVLVEMDSKPSVNSLIDILDLVQTQDLKNLKEAVMQSSDNNGETRTFDPEKHIDAYIPERVNEQRISNLLQSLLVGLSIFAISVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFISPSRRTKILEGPHASFVESVPFKTVAMFTVLQCVYFLICYGVQLIPIGGILFPLPFFLLIPIREHLLPYIFKPIDLQELDAAEYEEILGVPNSMKDPSLDDNNAEILDQMTTYRGELKHRTVSQRRNTIFNEENQLIDIYL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1789g00022 658 Pfam HCO3- transporter family 458 548 IPR011531 GO:0006820|GO:0016020
Vium1789g00022 658 Pfam HCO3- transporter family 195 370 IPR011531 GO:0006820|GO:0016020
Vium1789g00022 658 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Vium1789g00022 658 Gene3D Helical hairpin bin 14 56 - -
Vium1789g00022 658 PANTHER ANION EXCHANGE PROTEIN 2 604 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1789g00022 Vium-Chr1789 173240 177710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1789g00022 3 651 Antiporters AT4G32510 61.664 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1789g00022 K24194 - gmx:100808880 955.281