Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1758g00003 ATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTCAGCAAAATGTCGATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACGGAGTGTGAGCCTAATATGACCAACTACTGGCAAAGCTCCTTTGATGCTCTACCTCCTGAATGGATAGAACAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCAGGATTCTACCTCTCACAACTCTTCTCTTCAACTAGGAACACTTCCTCTTCTACCTCCCTTCCTTCAAAACCATCCACCTTTCCAATCAGGCCACCCCCTCCAACCCTCAACTGGGGTCAAAGGCCAATTGGGTCTGCTACTTCATTGCTACCCTCTCCAACTTTTCAACATGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAAACTCAAATGTTCCTCATGCCTCATTCATCATCAGAGCATGTGAGAATGGGAGACATGATGAGGGAGCATGAGAATGACATAAAGTGGCCAAATGGATTATCCATCTTCAATGTACTCACTGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGTGCAAATCCAACCTCAGTAGTGCAGAATGCTAGTGTGGCAAACCCGAATGAGTTCTTGAGCTTGGATGGCCACTCTGAAGGGACAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCTGCCAAAGTGGTTTCATCTTCATCCTCTACTTCTATGGATCACCATCATCAACAAGCAAGTGAGGAGTATAGGAATTCAGGTGGCATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1011 0.4481 MLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNMTNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTFPIRPPPPTLNWGQRPIGSATSLLPSPTFQHAARMGFPQAKDETQMFLMPHSSSEHVRMGDMMREHENDIKWPNGLSIFNVLTGRSDDAKLLFNQESANPTSVVQNASVANPNEFLSLDGHSEGTRKVDKFKRCFTLPAKVVSSSSSTSMDHHHQQASEEYRNSGGMYQDVMETFLE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1758g00003 336 MobiDBLite consensus disorder prediction 147 175 - -
Vium1758g00003 336 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 27 126 IPR025610 -
Vium1758g00003 336 MobiDBLite consensus disorder prediction 303 323 - -
Vium1758g00003 336 PANTHER GB|AAF34833.1 1 336 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1758g00003 Vium-Chr1758 4874 7824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1758g00003 24 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.559 1.85e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1758g00003 - - gmx:100789006 577.015