Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1758g00002 ATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACGGAGTGTGAGCCTAATATGACCAACTACTGGCAAAGCTCCTTTGATGCTCTACCTCCTGAATGGATAGAACAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCAGGATTCTACCTCTCACAACTCTTCTCTTCAACTAGGAACACTTCCTCTTCTACCTCCCTTCCTTCAAAACCATCCACCTTTCCAATCAGGCCACCCCCTCCAACCCTCAACTGGGGTCAAAGGCCAATTGGGTCTGCTACTTCATTGCTACCCTCTCCAACTTTTCAACATGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAAACTCAAATGTTCCTCATGCCTCATTCATCATCAGAGCATGTGAGAATGGGAGACATGATGAGGGAGCATGAGAATGACATAAAGTGGCCAAATGGATTATCCATCTTCAATGTACTCACTGGAAGATCTGATGATGCTAAACTCTTGTTCAATCAAGAGAGTGCAAATCCAACCTCAGTAGTGCAGAATGCTAGTGTGGCAAACCCGAATGAGTTCTTGAGCTTGGATGGCCACTCTGAAGGGACAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCTGCCAAAGTGGTTTCATCTTCATCCTCTACTTCTATGGATCACCATCATCAACAAGCAAGTGAGGAGTATAGGAATTCAGGTGGCATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 879 0.4551 MGKVTSDKCHKWVFKEPTECEPNMTNYWQSSFDALPPEWIEQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTFPIRPPPPTLNWGQRPIGSATSLLPSPTFQHAARMGFPQAKDETQMFLMPHSSSEHVRMGDMMREHENDIKWPNGLSIFNVLTGRSDDAKLLFNQESANPTSVVQNASVANPNEFLSLDGHSEGTRKVDKFKRCFTLPAKVVSSSSSTSMDHHHQQASEEYRNSGGMYQDVMETFLE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1758g00002 292 MobiDBLite consensus disorder prediction 103 127 - -
Vium1758g00002 292 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 1 82 IPR025610 -
Vium1758g00002 292 PANTHER GB|AAF34833.1 1 292 IPR044170 -
Vium1758g00002 292 MobiDBLite consensus disorder prediction 259 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1758g00002 Vium-Chr1758 4873 7824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1758g00002 1 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.043 6.55e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1758g00002 - - gmx:100789006 484.567