Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1757g00001 ATGAATTTCAACCAAACCATCTTCTCTTCGGCCACGCTGCTGGTCAGCATCCCTCTCTCACGACGTGAGATCTACAACGTGTGCATGGATCAGCCCATGAAGATTATCTCCGATGGCATTTGGAACCACCCCAATGGTTCATCGCCCGCACAATCTGCATACACCATGCTTCAGATTCAAATGGCTGGTTTTCTGCTAGGGCCAACAATTCCGACAGGACCATTCGAAAAGTACAAGAAGATGTTGTTCCCTTTTGGGAGTGCTGATATCCTGAACACGGTGTCATCGTTAGGGTTCTCATTCTTCCTCTTCATAACCTCAGTGCAAATGGACCTGAGCTTGATCACGAAAACGGGGAAGAAAGCATGGGTCATGGCACTTTCCTCCTACTTCGTCTCCATAGCTATTGGGTTTTCCGTCATGAACTTGTTGTCTTCCCAGCTGGAACAAATAAATGATGATTATGACAGTTTCTCGAGCTTGCCAATGGTCATAGTAACTCAGGGCGGCGTTTCCTTCGCCGTCGTCTCCACCTTGCTCAACGACCTCGGGATTCTCAACTCCGAACTCGGTCGCCTTGCCCTCTCCACAGCTTTCGTCAATGACCTAACTGGTGGAATCGCAGCAGGGTTCGGCGCAGACTATGTGAAAAGCGTGCAGTTGGGATTTCCTATTCTAGTCACAAACGTGGTGGCGTTTTTTGTTTACCTAATCGGCATTCCACTGATTGGGCGACCGGCGATGAAGTGGATTGTGAAGAACACCCCAGAAGGGAAACCCGTGAGCAAGATATATATCTATTCCATCATAGTGTCGTTTCTGGGATTAGGGTTCTTCGCTGGGTATTTCAACCAACCTTTCTTAGTAGGGGCTATTATTTTAGGCCTTGCAGTCCCTGAAGGTCCACCGTTGGGGTCAGAATTGGTTTCCCAACTTGAGTTGTTTTGCAGTTGGTTCCTCACCTCAATTTTTGTCACATGTTGCACCATGAAGGTGGATCTCAAAGCCTGTGTACCTTTATCCTTTTTTGTGGTCGTGTTCTTCTTCATTCTATTAGCCCAATTGATTAAGATGCTATTGTGCATGGGAATTTGCCGCTACTGTAAAATGCCCTACTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCAGCAAAGGTGTTGTGGATGTCTGCTCCTATGTCCTCATGTTCGATTCAATGGCACAAAACAAACAAGTAATAGGGGTTTTGATCGTGTCGGTGTTGGTTCTGGGAACAACTTCGAAGATTGGTGTGAAAGCACTGTATGACCCTTCAAGGAAATACGCAGGGTATCAAAAAAGGAACATCATGAGCTTGAAGCAAAATCATGAGCTTAGGATTGTTGCATGCATCCAAAAGACATACCAAGTGATTCACATGAAAAACGTGCTCCAGCTGTGTTCTCCTTGTCCAGAGAACACACTGGTGGCAGATATTCTGCATCTGATGGAGCTGGTTGGAAGGTCCACTCCCATTTTCATTGCACACAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCCGGGGAACTCATCGTGACCTTTGACCTTTTTGAACGTGACTATGCGGGTTGTGCCACCGCCAACACCTACACTGCCATATCCCCAATGGCACTGATGCATGAAGATGTGTGTCACCTTGCTCTGGACAAAAACGCCGCCATTATAATCCTTCCATTTCATCTGAAATGGGGAGGGGATGGTTCGATTGAGTTAGAGGACAACAACATAAGGTCATTTAACTCAAGGGTTTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTGTGAGCCGTGGCCCTGCTGGGTTCAGCGCAGCAAATTACAAAGTGGCCATGGTTTTCTTGGGAGGAGCAGATGACAGAGAGGCCTTGTGCTTGGCTAAGAGGTTCACCAAAAACCTTGGCAACAGGTTGTTTGTGTATAGGTTGGTTGCATACGATCGTGATATGTCGAATTGGGAAGACATGATTGATGATGAGGAGTTGCGGGAGGTGCGTGGAGCCTATGGAAAACTTGAAAATGTTACATACGAAGAGCACACCATAGAAGATGCATCTCAGACAACGGTTTTCATCAAAGACATAGCCAACAAATTTGATTTTATCATGGTTGGAAGACGCTACGGAATGAGATCTTCTCAAACCTATGGGTTGGAAAATTGGACTGAATATTCGGAGTTGGGAGTCATCGGAGATTTGCTTGCTTCACCTGATATGGAGACTAGGGCTTCTGTTTTGGTTGTCCAACAACAGTCAACGGCTGTGTCATGA 2295 0.4649 MNFNQTIFSSATLLVSIPLSRREIYNVCMDQPMKIISDGIWNHPNGSSPAQSAYTMLQIQMAGFLLGPTIPTGPFEKYKKMLFPFGSADILNTVSSLGFSFFLFITSVQMDLSLITKTGKKAWVMALSSYFVSIAIGFSVMNLLSSQLEQINDDYDSFSSLPMVIVTQGGVSFAVVSTLLNDLGILNSELGRLALSTAFVNDLTGGIAAGFGADYVKSVQLGFPILVTNVVAFFVYLIGIPLIGRPAMKWIVKNTPEGKPVSKIYIYSIIVSFLGLGFFAGYFNQPFLVGAIILGLAVPEGPPLGSELVSQLELFCSWFLTSIFVTCCTMKVDLKACVPLSFFVVVFFFILLAQLIKMLLCMGICRYCKMPYSDGFCLALILSSKGVVDVCSYVLMFDSMAQNKQVIGVLIVSVLVLGTTSKIGVKALYDPSRKYAGYQKRNIMSLKQNHELRIVACIQKTYQVIHMKNVLQLCSPCPENTLVADILHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGCATANTYTAISPMALMHEDVCHLALDKNAAIIILPFHLKWGGDGSIELEDNNIRSFNSRVLERAPCSIGILVSRGPAGFSAANYKVAMVFLGGADDREALCLAKRFTKNLGNRLFVYRLVAYDRDMSNWEDMIDDEELREVRGAYGKLENVTYEEHTIEDASQTTVFIKDIANKFDFIMVGRRYGMRSSQTYGLENWTEYSELGVIGDLLASPDMETRASVLVVQQQSTAVS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1757g00001 764 Gene3D - 57 436 IPR038770 -
Vium1757g00001 764 PANTHER CATION/H + ANTIPORTER 60 760 - -
Vium1757g00001 764 Pfam Sodium/hydrogen exchanger family 61 416 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1757g00001 Vium-Chr1757 8047 11017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1757g00001 76 759 Antiporter Super Family AT5G22900 35.556 2.65e-140 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1757g00001 K26731 - gmx:100797272 1148.27