LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium1747g00005	ATGGATAACTATCCATTTTTTGATTCTCAAATACATTCTGATTTTATGTCAGAGTTTTCTTCTTTTCTAAATGAAGTGGGTGAGGGTGATTACACAGATCAATTTTCCACTGATCAAATATTCCCATCTCGCACCGATTTAATTGAATGGGTTCGAAAGATTGCATTTGATCTTGGATTTGTTGTCGTCATTATAAGATCTGAAACAAAAACTGGTGAAGCTGGTAGAAAGACATTTATTTTGTTAGGCTATGAAAGAAGCGGGAAGTATAGGAAGTATAAGGCAGATGTTCAACCTAGTGTATCTAGCACAAGCAAATGTAAGTGTCCGTTCAGGTTGAGGGGTAAACCTAAAGGAGAGGGTTGGGTGTTAAAGGTTATGTGCGGCTATCACAACCATAAATTAGCAGAGACTTTGGTCGGTCATCCTCTCACGGGGAGGTTAAATGCTGTTGAACAGTCAATTCTTGTGGACATGACTAATAGTCAAGTAAAGCCGTCAAATATTCTTTTGACTCTGAAAGAACATAATGAAGATAACGTGACCACGATAAATCAAATATATAATGCGAGGTACACTTACAAACGATCTTTGAGAGTGTCGAGAACTGAAATGCAGTAG	621	0.3768	MDNYPFFDSQIHSDFMSEFSSFLNEVGEGDYTDQFSTDQIFPSRTDLIEWVRKIAFDLGFVVVIIRSETKTGEAGRKTFILLGYERSGKYRKYKADVQPSVSSTSKCKCPFRLRGKPKGEGWVLKVMCGYHNHKLAETLVGHPLTGRLNAVEQSILVDMTNSQVKPSNILLTLKEHNEDNVTTINQIYNARYTYKRSLRVSRTEMQ	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium1747g00005	206	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	80	195	IPR010061	GO:0004491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium1747g00005	Vium-Chr1747	39433	40053	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vium1747g00005		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium1747g00005	-		-	vra:106752687	362.073