Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1739g00003 ATGAACTTCAGGAACTACGGTTATAATAACCCCACTTGGGATGCCATGCATGGGAAGACACCGGCGGCAAATGTTGGTTCTCTACTGAGACAGCCATCATCTGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGGGTTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGACATTTTCAGCTGGTACAGGAGAAGGCCACAACCTTAACTCAATTAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAAAAAACAGTAGATGAGGTTTGGAAGGACTTGATCAAAGAAAGTAGTGGGGCCAATGATGGGAATGGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACATTGGGAGAAATGACTTTAGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTAACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGTTTCCATCAACCAAATAGAAGTAATGGGAATATGGGTGAGAGGGTGGTGGAGACCAACAATAACTTAGCTCCCAAACAACCTCCTCCTCTATCACTAAACTCAAACCACTCTCACCGACCAACACAACAGCCACCACTTTTTCCAAAGCCTGCAAATTTATCTTTTGCTGCTCCTATGCATTTGTTGAACAGTGCTGCACTTGCTAGCCCTGGCAGAAGAGGAGGGTTGATCGACCATTCATTGAATGTTGGACTGGTTGGTTTAGTCTCGGGTAATCCAGAGGCTTCTCCCTCAAGGAAAATATCATCAGATGTAATTACAAGAAGTAATGTAGACAACTCTCCACTGTCGCCAGTTCATTATTCAATCAACAGGGGAAGAAAATCTAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATCAAAAATATACACTTTCGAACTAGAATTGCAAAGAAAACAGGCAGAAATTAA 1059 0.4306 MNFRNYGYNNPTWDAMHGKTPAANVGSLLRQPSSVYSLTFDEFQSTMGGVGKEFGSMNMDELLKNIWTAEETQALTFSAGTGEGHNLNSISGGLQRQGSLTLPRTLSQKTVDEVWKDLIKESSGANDGNGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQQIGKPNNNGWFGNFPRPNNNNGLLLGFHQPNRSNGNMGERVVETNNNLAPKQPPPLSLNSNHSHRPTQQPPLFPKPANLSFAAPMHLLNSAALASPGRRGGLIDHSLNVGLVGLVSGNPEASPSRKISSDVITRSNVDNSPLSPVHYSINRGRKSSAIEKVVERRQRRMIKNIHFRTRIAKKTGRN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1739g00003 352 MobiDBLite consensus disorder prediction 211 234 - -
Vium1739g00003 352 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 338 IPR043452 GO:0003700|GO:0045893
Vium1739g00003 352 MobiDBLite consensus disorder prediction 124 142 - -
Vium1739g00003 352 MobiDBLite consensus disorder prediction 211 236 - -
Vium1739g00003 352 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1739g00003 Vium-Chr1739 7257 10713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1739g00003 29 338 bZIP Transcription Factor Family AT1G45249 49.133 2.82e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1739g00003 K14432 - gmx:100776600 469.544