Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1737g00001 ATGGAACAATTTTCACGAACCAGAATCAAATCTTCATCTTCAATTCTGTCATGTCCCTACCGACACAAACGTTGCTACGCATATATAAATCTTAATCCATGTACCATGTTCATTCCTACGTTATTATTACATATACACGTTACTTCATTGCTTCCATTCCATATGTTATCCACGGCCACCGCAGACGGCGTGCCGGCGCCGTACAACTCGACTGTGGCTACAAGTCTGGGAAGGCGGCGGATTCCGATACACACGACGTTCTACTGGGGGCATAAGGTGGATATACTTTTCGGGTGCTGGCCGGGAGACAGCGCCGCCATGTACGCTGTGGCGCTGCTCCTCGTGTTCTTTATGGCGGTGCTGGTGGAGTGGCTCTCGTTCACCAACATTGTGAAACTCAAGCCCGGGGGCTCAAACGACGTCGTTGGAGGACTCCTGAAGACGGGGCTTTACGGCGTGCGTTCGGGGCTCTCTTACTTGGTGATGTTGGCCGTTATGTCTTTTAACGGTGGTGTATTTGTCGTCGCTATAAGCGGCCACGTCATTGGGTTCTTGATTTTCGGGACAAGGGCTTTAAGGAAGAAATCCAATGGGTTGGACTCTTCGAAAGCGTAG 615 0.5041 MEQFSRTRIKSSSSILSCPYRHKRCYAYINLNPCTMFIPTLLLHIHVTSLLPFHMLSTATADGVPAPYNSTVATSLGRRRIPIHTTFYWGHKVDILFGCWPGDSAAMYAVALLLVFFMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFVVAISGHVIGFLIFGTRALRKKSNGLDSSKA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1737g00001 204 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 83 194 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vium1737g00001 204 Pfam Ctr copper transporter family 145 187 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vium1737g00001 204 Pfam Ctr copper transporter family 86 128 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1737g00001 Vium-Chr1737 1882 2753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1737g00001 86 197 Inorganic Solute Cotransporters AT5G59030 50.000 2.58e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1737g00001 K14686 - gmx:100803410 281.182