Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1710g00001 ATGGCTAGATTCAAGATAAACCATCAGTTCTTGTTTTCTTCTTCTATTCTAATCTTTTTGGTTGTACTTCCAACTTTAGTTAAAGCAGAATGTACATGTGACGAAGAAGAGGAGGATCGTGACAGAGGAAAAGCTATGAGGTACAAAATAGCAGCTTTGGTATCAATTTTAATTGCGAGTGCAGTTGGGGTGTGTATTCCTCTTCTGGGCAAAGTCATACCAGCGTTGAGTCCGGAGAAGAATGTTTTCTTCCTAGTAAAAGCTTTTGCTGCCGGTGTGATTCTAGCCACTGGATTCATCCACGTATTACCGGATGCTTTTGAGAATCTGACCTCACCTTGCTTGAAAGAGCATCCATGGGGAGATTTTCCCTTTACTGGGTTCGTGGCAATGTGTACTGCCATGGGAACTCTGATGGTGGATACTTATGCCACTGCTTATTTTCAGAAATACCATTCCAAAGAAGTACAGAATGAGAGTGGAGATGTGGAGAAAGAGACAGGTCACGAAGGACATGTGCATCTTCACACGCATGCAACGCATGGCCATGCTCATGGCTCTGTTCACTCCCACGATCACTCTTCCCAGCTTCTACGCCATCGAGTCATATCCCAGGTGTTGGAGTTGGGAATTATTGTTCACTCTGTTATTATTGGAATTTCATTGGGAGCTTCAGAGAATCCTAACACCATAAGACCATTAGTAGCTGCGTTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATATCTCAGGCAAACTTCAAGAGAGTATCTGTCACAGTGATGGGATTGTTCTTTGCATTGACTACTCCAGTAGGAATTGGAATTGGCATAAGTGTTTATGATGAGAACAGTCCAACTGCTCTTATTGTGGAAGGAGTTTTTAATGCAGCTTCAGCAGGGATCTTAATTTACATGGCTCTGGTTGATCTTCTTGCCAATGATTTCATGAGTCCAAGAATGCAACAAAGTAGCAGACTCTGTTTTGGAGCCAATATTTCTCTTTTGCTTGGAGCTGGTTTGATGTCTCTCATAGCTAAATGGGCTTAA 1062 0.4228 MARFKINHQFLFSSSILIFLVVLPTLVKAECTCDEEEEDRDRGKAMRYKIAALVSILIASAVGVCIPLLGKVIPALSPEKNVFFLVKAFAAGVILATGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQKYHSKEVQNESGDVEKETGHEGHVHLHTHATHGHAHGSVHSHDHSSQLLRHRVISQVLELGIIVHSVIIGISLGASENPNTIRPLVAALTFHQFFEGMGLGSCISQANFKRVSVTVMGLFFALTTPVGIGIGISVYDENSPTALIVEGVFNAASAGILIYMALVDLLANDFMSPRMQQSSRLCFGANISLLLGAGLMSLIAKWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1710g00001 353 Pfam ZIP Zinc transporter 48 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium1710g00001 353 NCBIfam ZIP zinc/iron transport family 31 353 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium1710g00001 353 PANTHER ZINC/IRON TRANSPORTER 45 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1710g00001 Vium-Chr1710 6520 8493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1710g00001 28 353 Inorganic Solute Cotransporters AT3G12750 55.389 1.60e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1710g00001 K14709 - gmx:547695 495.352