Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1705g00001 ATGGCTACCATGACTCGTTTTGTTCTATGCTTTTCCTGCATCGTTATCCTTAACCTCGTCTATAGCATGGCTCAATCTGATAACTATATCATCCACATGGACAAATTAGCCATGCCGAAAGCATTTTCCACCCACCATGCTTGGTATTTGTCCACTCTTTCCTCTGTATTGGATAATGCTCATACCTTCAATGATGACAATCTTGACATTGCTTCTTCTAAACTGATTTACACCTACACCAACGCCATGAATGGTTTTACTGCAAATTTGTCACCACAGGAAATTGAAGCTCTCAAAACCTCCCCGGGCTACGTTTCTTCCACACCAGATTTGCCGACCAAGCTTGACACAACACACTCACCGGAATTCCTTGGCCTTAATCCCAACACAGGAGCTTGGCCTGCTGCGAAATTTGGTGAAGATGTCATTGTTGGTTTGGTGGACACTGGAGTATGGCCAGAAAGTGAAAGCTTCAACGATAAAGGGATGCCTGATAAGCTTCCTTCACGATGGTATGGCAAATGTGAAAGTACTATCAAATGCAACAAGAAACTCATTGGAGCTCGCTTCTTTAACAAAGGGTTTCTTGCCAAGAATTCCAAATCGGCCAAAATTGTGCACTCAACTAGGGACACAGATGGCCATGGAACTCACACATCTTCCACGGCAGTTGGAAGCCAAGTTGTTAATGCATCATTCTTTGGAAATGACAATGGATCAGCGAAAGGAGTTGCTCCAAGGGCAAGAGTAGCCATTTACAAGGTCTTGTGGGGTGAAATGCTTTACGCATCTGATTTGATAGCTGCAGTTGATGCTGCAATATCAGATGGGGTTGATATTCTTTCCCTTTCACTTGGCTATAATGTTTTGACTTTGTTCGAAGACCCTATGGCTATAGCAACATTTGCAGCCATGGATAGAGGCATTTTTGTGTCCACGTCGGCAGGGAATTCAGGGCCTAAACGTGAAACTCTGCACAATGGAATACCATGGGTCATAAACGTGGCTGCTGGCACTTTGGATCGTCAAATTCAGGCGTCTCTTACCCTTGGCAATGGTGTCAAACTATTCGGTTTATCAACTTATCTATTAGGAAACTTCTCAGCACACCAAGTTCCTATTGTTTTTTCCGGTTCATGTGACAATTTCACGGAACTAGTCAAAGCACGTAACAAGATTGTGGTGTGTGAGGTTATGGATGCAAATCTTCCAAATCTTGTGTATAATATAAAGGCTTCAAATGTTTTAGCATCAGTGTTCATTTCAACTTTCAACGATGTTGCAACTGTTAATGAGCTTGGTCTTGTAGGCGTCATTGTAAACCCAAGAAATGGAGAAACGATCAAAGCATACATCAAGAGTAACTCTGATGCAAAAGCAAGCATGTCTTTTCAGATAACAACATTAGGTATTAAACCTGCACCGAGAGTGGATCGTTACAGTTCTAGAGGGCCATCAATTAGTTGCCCCTTTGTGTTGAAACCAGATATCACCGCTCCTGGTACATCAATCTTAGCTGCATGGCCTGAAAATCTTCCAGTGTCCAGTCCTGGATCAATACCCCTTTATAGTAACTTCAATCTTTTATCTGGAACATCTATGGCATGCCCTCATATGGCAGGTGTGGCAGCATTGTTAAAAGGAGCACATCGTGATTGGAGCCCTGCAGCTATTAGGTCAGCCATCATGACAACATCGGATATATTCGACAACAATAAGGAACCCATTAAAGACATTGGTGACGGAGACAAACCAGCATCTCCTTTAGTCATGGGAGCTGGTCATGTCAACCCCAACAAAGCCCTAGACCCTGGACTTGTTTACGATGCGGGTGCTCAGGATTACGTCAATCTTCTCTGCGCAATGAACTTAACTCAACAACACATCAAAACCATCACAAGATCCTCTTCCTACAATTGTTCCAAACCTTCCTTGGATCTTAACTACCCTTCTTTCATTGCTTTGTTCAGTGAAAATGGTTCTTCTAAACAGTCTATGGGAACTTGGGAATTTTTTAGAACAGTGACCAATGTTGGGGAGGGACAAACAATCTATACTGCTAGGGTTACACCAATCAAAGGGTTCAATGTTAGCATCACCCCAAGCAAGTTGGTGTTCAAGGAGAAGAACCAGAAGCTAAATTACAAGTTAAGAATTGAAGGTCCAAAGAGGGAGGGTTTCGGGTACGTCACTTGGACTGACGTGAAACATGTTGTGAGGAGTCCTATTGTGATCACCTATCCACCATCTCAACAATAA 2259 0.429 MATMTRFVLCFSCIVILNLVYSMAQSDNYIIHMDKLAMPKAFSTHHAWYLSTLSSVLDNAHTFNDDNLDIASSKLIYTYTNAMNGFTANLSPQEIEALKTSPGYVSSTPDLPTKLDTTHSPEFLGLNPNTGAWPAAKFGEDVIVGLVDTGVWPESESFNDKGMPDKLPSRWYGKCESTIKCNKKLIGARFFNKGFLAKNSKSAKIVHSTRDTDGHGTHTSSTAVGSQVVNASFFGNDNGSAKGVAPRARVAIYKVLWGEMLYASDLIAAVDAAISDGVDILSLSLGYNVLTLFEDPMAIATFAAMDRGIFVSTSAGNSGPKRETLHNGIPWVINVAAGTLDRQIQASLTLGNGVKLFGLSTYLLGNFSAHQVPIVFSGSCDNFTELVKARNKIVVCEVMDANLPNLVYNIKASNVLASVFISTFNDVATVNELGLVGVIVNPRNGETIKAYIKSNSDAKASMSFQITTLGIKPAPRVDRYSSRGPSISCPFVLKPDITAPGTSILAAWPENLPVSSPGSIPLYSNFNLLSGTSMACPHMAGVAALLKGAHRDWSPAAIRSAIMTTSDIFDNNKEPIKDIGDGDKPASPLVMGAGHVNPNKALDPGLVYDAGAQDYVNLLCAMNLTQQHIKTITRSSSYNCSKPSLDLNYPSFIALFSENGSSKQSMGTWEFFRTVTNVGEGQTIYTARVTPIKGFNVSITPSKLVFKEKNQKLNYKLRIEGPKREGFGYVTWTDVKHVVRSPIVITYPPSQQ 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1705g00001 752 Pfam Subtilase family 139 570 IPR000209 GO:0006508|GO:0008236
Vium1705g00001 752 CDD PA_subtilisin_like 347 461 - -
Vium1705g00001 752 CDD Peptidases_S8_3 114 567 IPR034197 -
Vium1705g00001 752 Gene3D - 619 747 - -
Vium1705g00001 752 ProSiteProfiles Serine proteases, subtilase domain profile. 112 602 - -
Vium1705g00001 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 744 IPR045051 -
Vium1705g00001 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 115 IPR037045 -
Vium1705g00001 752 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vium1705g00001 752 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Vium1705g00001 752 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Vium1705g00001 752 SUPERFAMILY Subtilisin-like 115 606 IPR036852 GO:0004252|GO:0006508
Vium1705g00001 752 Pfam Peptidase inhibitor I9 29 115 IPR010259 -
Vium1705g00001 752 Gene3D Peptidase S8/S53 domain 141 615 IPR036852 GO:0004252|GO:0006508
Vium1705g00001 752 FunFam Subtilisin-like protease SBT1.9 18 116 - -
Vium1705g00001 752 Gene3D - 341 469 - -
Vium1705g00001 752 Coils Coil 751 752 - -
Vium1705g00001 752 Pfam Fibronectin type-III domain 646 745 IPR041469 -
Vium1705g00001 752 FunFam Subtilisin-like protease SBT1.5 141 350 - -
Vium1705g00001 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1705g00001 Vium-Chr1705 3978 6289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1705g00001 1 734 Subtilisin-like Serine Gene Family AT5G67090 44.401 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1705g00001 - - gmx:100787831 1035.02