Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1702g00011 ATGGGTTGCAGGGACATGAGAAAGGTGAAGTGGGGGAAGAGGAGGAGGAGGCAAGAGGGTGTGGAGAGGAGGATGAAGAAGCTGCAGCGCCTGGTTCCCGGTGGCGCCGGAATGAACCCCGACCGGCTCTTCCTTAAGACGGCGGAACACATCTTAAAATTGAGGATCCAACTCAATGTGCTGCAAGCTCTTTCCAAGGTTTTCAATGCTTGA 213 0.5399 MGCRDMRKVKWGKRRRRQEGVERRMKKLQRLVPGGAGMNPDRLFLKTAEHILKLRIQLNVLQALSKVFNA 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1702g00011 70 CDD bHLH_AtIBH1_like 13 64 IPR044549 GO:0006355
Vium1702g00011 70 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 68 IPR044660 GO:0006355
Vium1702g00011 70 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 66 IPR036638 GO:0046983
Vium1702g00011 70 MobiDBLite consensus disorder prediction 1 22 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1702g00011 10 64 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 42.623 1.07e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1702g00011 - - pvu:PHAVU_003G053700g 128.642