Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1693g00001 | ATGAAGCCTGTAGAAAATGGTGAAACCGTTGACATAAACTATCAAAATAGCTGGTTAGGTTTCTCCCTCTCCCCGCAAATGAATATAACTGTTCCTTCACACTCTCATCAAACACACCCTTCATCTGCTGCTGCTGCTGAAACAGTTCCACCAACGTATTACCACCACACACCTCTTCATAACTATGGAATCCTAGGTGAACATGTTGGAATGTTTTCTTCCTTGCCTATCGTGCCCCTTAAATCCAATGTCTCGTTCTATGGAATAGAGGCTATCAGCAGGTCACAAGCACAAGAAATGGCAACTACTTCGGCAATACCTCTGAGCTTGGATAGTATGTTTTACAACCAACTCTCATGTCATGGATCGAACGATCCAAATAACCAAAACCATGTACAAGAGAACATCAGCAAGCAACAGCCACCATATTATTCTTCCTTAAGAAACAACCATGATGTGATTTTAGAAGGGTCTAAGCAGCAACTCCCTTGTATAGCTGAGGATGAAGTTGCTTGTCTGAAAAGTTGGTTCTCGAGGGACTTTCCTGCTTGTCAAGCGCAGGAGTCAAGGATGTTTGTTCCTTTGGAGGATAATGGAAGCAAATCTGGACCCAATATTGGATCAATAACATATGGGGATTTACATTCGTTGAATTTGTCTGTGAGCCCTACCAGACCATCAAGCCGTGTTACAGGTTCGCCTGCCATCAATGATACGAAGAAAAGGGGGCTTGAAATGGTGGACCAGAATCAGAAGAAAATAGTACATAGGAAATCCATAGACACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGTTGCAAGAAGGAGGGCCAAGGAAGGAAAGGAAGGCAAGTGTATCTGGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTACGACATGGCCGCACTCAAGTATTGGGGACCCTCCTCTCATATAAATTTCCCTTTGGAAAATTATCAAAACGAACTTGAGGAAATGAAAAACATGACGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAGGAGCATCCATGTATAGAGGAGTAACAAGGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGGAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAATAGAGGACTTATCAGTGCAGTAGCAGTGAATTACCTCAAAGGCAACAATGGTGAGAAAAAGGCACGAAGATACGCTTCCCATCGCCCCACACGAAAAGGATGGTGA | 1314 | 0.4338 | MKPVENGETVDINYQNSWLGFSLSPQMNITVPSHSHQTHPSSAAAAETVPPTYYHHTPLHNYGILGEHVGMFSSLPIVPLKSNVSFYGIEAISRSQAQEMATTSAIPLSLDSMFYNQLSCHGSNDPNNQNHVQENISKQQPPYYSSLRNNHDVILEGSKQQLPCIAEDEVACLKSWFSRDFPACQAQESRMFVPLEDNGSKSGPNIGSITYGDLHSLNLSVSPTRPSSRVTGSPAINDTKKRGLEMVDQNQKKIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSSHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFNRGLISAVAVNYLKGNNGEKKARRYASHRPTRKGW | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1693g00001 | 437 | CDD | AP2 | 268 | 335 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | ProSiteProfiles | AP2/ERF domain profile. | 371 | 432 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | SUPERFAMILY | DNA-binding domain | 268 | 337 | IPR016177 | GO:0003677 | |
Vium1693g00001 | 437 | Coils | Coil | 336 | 356 | - | - | |
Vium1693g00001 | 437 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 268 | 337 | - | - | |
Vium1693g00001 | 437 | ProSiteProfiles | AP2/ERF domain profile. | 269 | 335 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 238 | 403 | - | - | |
Vium1693g00001 | 437 | SUPERFAMILY | DNA-binding domain | 370 | 409 | IPR016177 | GO:0003677 | |
Vium1693g00001 | 437 | Gene3D | AP2/ERF domain | 268 | 337 | IPR036955 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | Gene3D | AP2/ERF domain | 371 | 414 | IPR036955 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | PRINTS | Ethylene responsive element binding protein signature | 270 | 281 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | PRINTS | Ethylene responsive element binding protein signature | 317 | 337 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | SMART | rav1_2 | 269 | 341 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | SMART | rav1_2 | 371 | 435 | IPR001471 | GO:0003700|GO:0006355 | |
Vium1693g00001 | 437 | Pfam | AP2 domain | 269 | 327 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1693g00001 | Vium-Chr1693 | 6206 | 11408 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1693g00001 | 49 | 402 | AP2-EREBP Transcription Factor Family | AT4G37750 | 47.689 | 1.50e-105 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Vium1693g00001 | AP2 | 3.3e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1693g00001 | K09285 | - | gmx:100794433 | 663.299 |