Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1692g00009 ATGTCGATAGTGCAACTCTCTCCTCCGATACACTCCCAATTTTCTTCCCACCACAATCCTCCGACAACTTCGGACCGTGGCATTGTATTCCACGAAAAGGTGCGGTACCTTAAAGCCCTCAAAGTGAATCCGGAGAAGGCCTTCCGCTTGAACCCCGAACTCCGCTCCTCCCCTCTCGCCACCCTGGAATCCGTCACGCGCTGTCTCTACTCCCTCGGAGTCCCACGCGCCTCCTTGGGGCGCATCCTCGACATGAACCCCGTGCTCCTCACCTGCAACCCTTATTACCAACTCTATCCCCTCCTTGACTTCCTCCTCCATGAGGTCCCAATCCCCTTCCCCGACGTCCACCTCTGCATCCTTCGCTGCCCCAGATTGCTCGTTTCCAGCATTGATAATCAATTGCGTCCCACACTGTTCTTTCTCAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGAACACTCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTGGGGTTCACCCATATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTGTTGACTTTAAGCGTGAAGAAGAATTTGGTGCCCAAAGTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTTCTGAGCTCAAGAGGTTTCCTCAGTATTTTTCTTTTAGCTTGGAACGGAAGATTAGGCCGAGATTTGGGATGCTGAGGCAGCTTGGCGTGTCGATGCCGTTGGCAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTGAGGTTTAAGACTCTTGAGTTTGGAGTAGGACAATAG 852 0.5141 MSIVQLSPPIHSQFSSHHNPPTTSDRGIVFHEKVRYLKALKVNPEKAFRLNPELRSSPLATLESVTRCLYSLGVPRASLGRILDMNPVLLTCNPYYQLYPLLDFLLHEVPIPFPDVHLCILRCPRLLVSSIDNQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLENTLLPKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVKKNLVPKVEFFLKEMNGDVSELKRFPQYFSFSLERKIRPRFGMLRQLGVSMPLADMLKVSDGEFNARLLELRFKTLEFGVGQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1692g00009 283 MobiDBLite consensus disorder prediction 1 26 - -
Vium1692g00009 283 Gene3D Transcription termination factor 3, mitochondrial 54 278 IPR038538 -
Vium1692g00009 283 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 SMART mt_12 187 219 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 SMART mt_12 45 75 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 MobiDBLite consensus disorder prediction 1 23 - -
Vium1692g00009 283 PANTHER CGI-12 PROTEIN-RELATED 47 270 IPR003690 GO:0003690|GO:0006355
Vium1692g00009 283 Pfam mTERF 47 265 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1692g00009 Vium-Chr1692 123170 124325 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vium1692g00009 mTERF 3.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1692g00009 K15031 - gmx:100785219 436.802