Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1678g00001 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAACGTCTGCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTACCATCTCATCGCTTCCACAGACTGCTTCAGGTTCGCCGCTACGTTTACCATGATGTTGTTAGGCTTGAAGATCTTCAGAAACTCATAGATTGCTCCAACGTTCAGGCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGATCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTTCAAGAGCCTTTCATTCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTACAAGGATCTGTCTCCATACTTGAGGACATGCAACTCCCTACAACTAAGTCCTGATTTTCTGATCCCACAAGAGACGGTGGATGAAGAGGTGACTCGTTCAACGGTTGTGGATTGTGATGAGCCAATGAGTTCGTGTTCAGGGTCATCAGGGTCAGAGAACAACATGAGCATGTCTTGCACAGAGATTGTAAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAACAGCAATAACAAAGTTTCTGATGAAGACATGGCCACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCCCCACTGTGTTAG 744 0.4516 MIMGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQETVDEEVTRSTVVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSNNKVSDEDMATSMSRRKGIPHRSPLC 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1678g00001 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 246 - -
Vium1678g00001 247 MobiDBLite consensus disorder prediction 228 247 - -
Vium1678g00001 247 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1678g00001 Vium-Chr1678 3823 5514 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium1678g00001 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1678g00001 - - gmx:100785737 488.034