Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1664g00027 ATGGATGCAATTTTCGCTTACATCATTGTCATTTTGCTTACCTTATTTTCATTCATCTTCTTACCAAAACTAAACAGAAGAAAACCTCAGAACCAAACAACCGCAAAGCTCCCTCCAGGTTCAATGGGATGGCCGTACATAGGAGAAACCCTCCAACTCTACTCCCAAGACCCAAATGTCTACTTTTCCACCAAACACAAAAGGTTTGGTGAAATATTTAAGACCAACATCCTGGGTTGTCCCTGTGTGATGCTGATCAGCCCTGAGGCTGCACGCTTTGTTCTAGTGACTCAAGCTCACTTGTTCAAACCAACTTACCCGAAAAGCAAAGAGCGTTTGATTGGTCCTTTTGCTTTGTTTTTCCATCAGGGAGACTACCACACTCGTCTGAGGAAGCTTGTTCAGAGGTCACTTTCTTTTGAAGCACTTCGCAACTTGGTGCCCCATATTGAAGCCTTAGTGTTATCTGGCATGAACTCTTGGGGTGATGGCCAAATCATTAACATGTTTAAGGAAATGAAAAGGATTTCTTTTGAAGTTGGAATCCTCACAACTTTTGGCCATCTAGAGCCACGTTCGAGGGAGGAGCTAAAGAAGAATTACCGTATTGTGGATGCTGGTTACAATTCCTTCCCAACTTGCATTCCAGGAACACAGTACAAAAAAGCACTGCTGGCTAGAAAGAGACTCGGGAAGATTATAAGTGAGATTATCTGTGAGAGGAAGGAGAAGAAGTTGGTCGAAAGGGATCTTTTGAGTTGTCTGTTGAATTGGAAAGGTGAAGGAGGAGAAGTGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCGAAACTTCTGGAGTCAGTAAAGGCAGAGCAGAAGGCTATTCAAAAGTCTAATGACGGTAATCTACCACTTAGTTGGGATCAGACTAGAAACATGAGAATTACTCACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATTATTTCATTCCCTTTCAGAGAGGCAATAGCTGATGTGGAGTACAAGGGATTCTTAATACCAAAAGGGTGGAAAGCCATGCCTCTATTCAGAAATATTCACCACAATCCTGAGTTTTTTCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTGGCACCAAAGCCCAATACTTTCATGCCATTTGGTAGTGGAGTGCATGCCTGCCCTGGCAATGAGCTTGCCAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAATTTAGGTGGGAAGTGGTAGGATCCAAGGGTGGAATTCAGTATGGTCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 1416 0.4357 MDAIFAYIIVILLTLFSFIFLPKLNRRKPQNQTTAKLPPGSMGWPYIGETLQLYSQDPNVYFSTKHKRFGEIFKTNILGCPCVMLISPEAARFVLVTQAHLFKPTYPKSKERLIGPFALFFHQGDYHTRLRKLVQRSLSFEALRNLVPHIEALVLSGMNSWGDGQIINMFKEMKRISFEVGILTTFGHLEPRSREELKKNYRIVDAGYNSFPTCIPGTQYKKALLARKRLGKIISEIICERKEKKLVERDLLSCLLNWKGEGGEVLSDDQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKAEQKAIQKSNDGNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKGGIQYGPFPLPLNGLPARCWRESTS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1664g00027 471 CDD CYP90-like 67 464 - -
Vium1664g00027 471 Gene3D Cytochrome P450 26 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 Pfam Cytochrome P450 38 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PANTHER CYTOCHROME P450 26 35 453 - -
Vium1664g00027 471 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Vium1664g00027 471 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium1664g00027 471 FunFam Abscisic acid 8 27 467 - -
Vium1664g00027 471 SUPERFAMILY Cytochrome P450 34 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1664g00027 Vium-Chr1664 179171 184513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1664g00027 7 469 Cytochrome P450 AT3G19270 66.164 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1664g00027 K09843 - gmx:100779978 898.271