Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1664g00006 ATGGACAACAGCGACACTAACACACCGACCACCGCAGAGGCAGAAGTAGCACACGATTTCCCCGGTCTCATCCGTGTCTTCACTGACGGTCGCATCCAACGTTTCAAAGGAACCGACGTCGTTCCACCCTCCACCCCCACCACTCACCCCGTCTCCTCCAAAGACGTCAATCTCAACCCTCATTCCACTCTCTCCGCTCGCCTCTTCCTCCCGACACCTCCATCCACCACCACCAACCACCGCCGCCGCCTCCCTCTCTTGGTCTATTTCCACGGCGGTGGCTTCTGTACCTCCTCCCCCTTCACCTCAACCTACCACCACTACATCGCAGCTGTCGCTGCCGAAGCCAAGCTCGTCGCAGTCTCCGTTCAGTACAGGCTGGCCCCGGAGCACCCTATTCCGGCAGCGTATGAGGATTCATGGGCTGCACTGCAGTGGGTCGCGTCACATCGCAGTAACGCTGGACCAGAACCTTGGTTGAATGAAAATGTAGACTTCGGAAGAGTGTTCTTGGCCGGGGACAGTGCCGGTGCCAACATAGTGCATAACTTAACTATGTTACTTGGGGACCCAGACTGGGACATTGGCATGGACATCCTAGGAGTTTGTCTTGTCCACCCGTATTTCTGGGGATCGGTTCCTTTGGGATCCGAGACCATGGATTTGGATAGGAGAGCTTTTGTGAACCGACTGTGGCCCTTTGTGTGTCCGGAGTCGCCGGACAATGATGACCCACGGATTAACCCGGTGGGGGAGGGATCACCGAGCTTGGCGTGGCTAGGGTGCAGGAGGGTGCTGATTTGTGTGGCGGAGAAGGATGTGCTAAAGGAGAGAGGGTGGATTTACTACAGTTCTTTGAGTAGAAGTGGGTGGATGGGGGTGGTGGAAATTAAGGAGACTCAAGGGGAGGGTCATGTCTTTCATCTTCATGACTTGGCTAGTGACAAGGCTCAGGATTTGATAAAAAGCTTGGCTCGTTTCTTCAACAGAGATCAGCCTCCTTCAATTTAA 1011 0.548 MDNSDTNTPTTAEAEVAHDFPGLIRVFTDGRIQRFKGTDVVPPSTPTTHPVSSKDVNLNPHSTLSARLFLPTPPSTTTNHRRRLPLLVYFHGGGFCTSSPFTSTYHHYIAAVAAEAKLVAVSVQYRLAPEHPIPAAYEDSWAALQWVASHRSNAGPEPWLNENVDFGRVFLAGDSAGANIVHNLTMLLGDPDWDIGMDILGVCLVHPYFWGSVPLGSETMDLDRRAFVNRLWPFVCPESPDNDDPRINPVGEGSPSLAWLGCRRVLICVAEKDVLKERGWIYYSSLSRSGWMGVVEIKETQGEGHVFHLHDLASDKAQDLIKSLARFFNRDQPPSI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1664g00006 336 Gene3D alpha/beta hydrolase 23 332 IPR029058 -
Vium1664g00006 336 MobiDBLite consensus disorder prediction 40 57 - -
Vium1664g00006 336 Pfam alpha/beta hydrolase fold 87 308 IPR013094 GO:0016787
Vium1664g00006 336 MobiDBLite consensus disorder prediction 38 57 - -
Vium1664g00006 336 PANTHER ARYLACETAMIDE DEACETYLASE 20 311 - -
Vium1664g00006 336 SUPERFAMILY alpha/beta-Hydrolases 10 330 IPR029058 -
Vium1664g00006 336 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 169 181 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1664g00006 Vium-Chr1664 34600 35795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1664g00006 13 332 Carbohydrate Esterase AT3G48700 46.341 4.81e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1664g00006 - - vra:106764914 669.077