Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1658g00008 ATGGCTAGCGGTCTCGTTCCCCTCATCTTAATGATTGTTGTGCAGCTAGTCTATGCCGGGATGAATATCACTTCGAAGCTCGCAATACAATCTGGCATGAGCCCTCTAGTCCTTGTTGCGTATCGACAACTCTTTGCCACCGTTTCCATTGCTCCCTTTGCATATTGGCTCGAATGGAAGACACTTCCCAGGTTGAATAAGCAGCTTATGTTTCGGATATTACTATCGTCCTTGACAGGAGTTACAGGAAATCAGATTCTATACTTTGTGGGGCTAAAATTTTCAACCGCTACAATTGCATGTGCACTGTCGAATTTGCTCCCAGCTTTCACTTTTATCCTGGCAGTTATCTTCAGACAAGAGAATCTAGGAATCAAGCAGAGGTCTGGCCTAGCAAAGGTATTCGGGACAGTATTGTGTGTGAGTGGAGCGTTGCTTTTGTCATTCTACCATGGAAAAACCATCGGTCTAGGGCAATCTAGTATTCACTGGAGATATGCAGAGAAAATGGAAGGAACTACCGCTTCTGGCTCAGGAAACATGTTTGTAGGCCCTTTACTCTTAATTGCTAGCACTCTTGTTTGGGCGCTGTGGTTCGTAATTCAAACAGACATAAGCAAGAGGTTCCCGGCTCCTTACACAAGCACAGGCTTAATGTGTTTCTTGGCAAGCTTTCAATGCATCATCATTGCATTATGTTTCGACCACAGTGTCTCAGCTTGGTCACTCCGCGATGCCATGAGACTTTCCGCCGCTCTTTATGCGGGAGTAATGGCGACCGGGTTGGCGTATTCCCTCATGTCGTGGGCCATTGAGAGAAAAGGTCCACTTTATGTCTCAGTATTTACGCCTTTGCAGCTTGTTCTCACAGCAATTTTAAGCTGGGCTTTGCTGCGGGAGAAACTATATGTTGGAACTGCCATAGGGTCTCTGTTGATAGTCTTGGGGCTCTACAGTGTTCTTTGGGGGAAGAGTGAAGAAGTGAGCACGGAAGACGGTGTGAAAGAAGGAGTGAAGGATCCGAAGAATGACACGGAAATGCAATATTACGTGCCATCCAATGGTAATCGTGTCAGTACTTGA 1083 0.4608 MASGLVPLILMIVVQLVYAGMNITSKLAIQSGMSPLVLVAYRQLFATVSIAPFAYWLEWKTLPRLNKQLMFRILLSSLTGVTGNQILYFVGLKFSTATIACALSNLLPAFTFILAVIFRQENLGIKQRSGLAKVFGTVLCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTTASGSGNMFVGPLLLIASTLVWALWFVIQTDISKRFPAPYTSTGLMCFLASFQCIIIALCFDHSVSAWSLRDAMRLSAALYAGVMATGLAYSLMSWAIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAIGSLLIVLGLYSVLWGKSEEVSTEDGVKEGVKDPKNDTEMQYYVPSNGNRVST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1658g00008 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 325 - -
Vium1658g00008 360 PANTHER WAT1-RELATED PROTEIN 6 328 IPR030184 GO:0016020|GO:0022857
Vium1658g00008 360 MobiDBLite consensus disorder prediction 332 360 - -
Vium1658g00008 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Vium1658g00008 360 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020
Vium1658g00008 360 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1658g00008 Vium-Chr1658 68593 71472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1658g00008 3 356 Nodulin-like Gene Family AT1G09380 56.198 1.10e-143 410